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    LOC107031214 GDP-mannose 3,5-epimerase 2 [ Solanum pennellii ]

    Gene ID: 107031214, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC107031214
    Gene description
    GDP-mannose 3,5-epimerase 2
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Solanum pennellii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
    Also known as
    GME2
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    Genomic context

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    See LOC107031214 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current SPENNV200 (GCF_001406875.1) 9 NC_028645.1 (80259174..80263730, complement)

    Chromosome 9 - NC_028645.1Genomic Context describing neighboring genes Neighboring gene pyruvate kinase isozyme A, chloroplastic Neighboring gene uncharacterized LOC107031432 Neighboring gene armadillo repeat-containing protein LFR-like Neighboring gene endonuclease III homolog 2, chloroplastic-like Neighboring gene inactive protein RESTRICTED TEV MOVEMENT 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_028645.1 Chromosome 9 Reference SPENNV200

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GDP-mannose 3,5-epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GDP-mannose 3,5-epimerase 2
    Names
    GDP-mannose 3',5'-epimerase
    NP_001310396.1
    XP_015087988.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001323467.1 → NP_001310396.1  GDP-mannose 3,5-epimerase 2

      Status: PROVISIONAL

      Source sequence(s)
      GQ150166
      UniProtKB/TrEMBL
      C6K2L1
      Conserved Domains (1) summary
      PLN02695
      Location:7 → 376
      PLN02695; GDP-D-mannose-3',5'-epimerase

    RefSeqs of Annotated Genomes: Solanum pennellii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SPENNV200

    Genomic

    1. NC_028645.1 Reference SPENNV200

      Range
      80259174..80263730 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015232502.2 → XP_015087988.1  GDP-mannose 3,5-epimerase 2 isoform X1

      UniProtKB/TrEMBL
      C6K2L1
      Conserved Domains (1) summary
      PLN02695
      Location:7 → 376
      PLN02695; GDP-D-mannose-3',5'-epimerase
    Nucleotide Protein
    Heading Accession and Version

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