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    DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 [ Empidonax traillii (willow flycatcher) ]

    Gene ID: 114055539, updated on 3-Aug-2024

    Summary

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    Gene symbol
    DNAJB6
    Gene description
    DnaJ heat shock protein family (Hsp40) member B6
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Empidonax traillii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Empidonax
    Orthologs
    human mouse all
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    Genomic context

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    See DNAJB6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current ASM303162v1 (GCF_003031625.1) Unplaced Scaffold NW_020955251.1 (1420081..1484114)

    NW_020955251.1Genomic Context describing neighboring genes Neighboring gene motor neuron and pancreas homeobox 1 Neighboring gene ubiquitin protein ligase E3C Neighboring gene receptor-type tyrosine-protein phosphatase N2-like Neighboring gene uncharacterized LOC114055542

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020955251 Unplaced Scaffold Reference ASM303162v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables Hsp70 protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chaperone-mediated protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dnaJ homolog subfamily B member 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Empidonax traillii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM303162v1

    Genomic

    1. NW_020955251.1 Reference ASM303162v1

      Range
      1420081..1484114
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027879798.1 → XP_027735599.1  dnaJ homolog subfamily B member 6 isoform X2

    2. XM_027879796.1 → XP_027735597.1  dnaJ homolog subfamily B member 6 isoform X1

    3. XM_027879797.1 → XP_027735598.1  dnaJ homolog subfamily B member 6 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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