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    RHB1A RING-H2 finger B1A [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828093, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RHB1A
    Official Full Name
    RING-H2 finger B1A
    Primary source
    TAIR:AT4G00335
    Locus tag
    AT4G00335
    See related
    Araport:AT4G00335
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    RING-H2 finger B1A; RING-H2 FINGER PROTEIN RHB1A
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    Genomic context

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    See RHB1A in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (145887..148424)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene F-box/RNI-like superfamily protein Neighboring gene calmodulin-binding receptor-like cytoplasmic kinase 2 Neighboring gene receptor-like protein kinase 4 Neighboring gene uncharacterized protein Neighboring gene MATE efflux family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001340240.1
    NM_116256.4
    NM_202759.2

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RING-H2 finger B1A
    NP_001319828.1
    • RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_567171.1
    • RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 5425 Blast hits to 5419 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1535; Fungi - 417; Plants - 2568; Viruses - 6; Other Eukaryotes - 899 (source: NCBI BLink).
    NP_974488.1
    • RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      145887..148424
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340240.1 → NP_001319828.1  RING-H2 finger B1A [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JH43, Q2HIJ8, Q8GXM5, Q9ZT44
      UniProtKB/TrEMBL
      A0A178V1J7, A0A7G2EW86
      Conserved Domains (2) summary
      cd00162
      Location:139 → 179
      RING_Ubox; RING-H2 finger (C3H2C3-type) [structural motif]
      cl17238
      Location:139 → 183
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    2. NM_116256.4 → NP_567171.1  RING-H2 finger B1A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567171.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JH43, Q2HIJ8, Q8GXM5, Q9ZT44
      UniProtKB/TrEMBL
      A0A178V1J7, A0A7G2EW86
      Conserved Domains (2) summary
      cd00162
      Location:139 → 179
      RING_Ubox; RING-H2 finger (C3H2C3-type) [structural motif]
      cl17238
      Location:139 → 183
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    3. NM_202759.2 → NP_974488.1  RING-H2 finger B1A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974488.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JH43, Q2HIJ8, Q8GXM5, Q9ZT44
      UniProtKB/TrEMBL
      A0A178V1J7, A0A7G2EW86
      Conserved Domains (2) summary
      cd00162
      Location:139 → 179
      RING_Ubox; RING-H2 finger (C3H2C3-type) [structural motif]
      cl17238
      Location:139 → 183
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2HIJ8.1

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