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    AGL amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase [ Apteryx rowi (Okarito brown kiwi) ]

    Gene ID: 112961937, updated on 20-Oct-2024

    Summary

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    Gene symbol
    AGL
    Gene description
    amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase
    See related
    Ensembl:ENSARWG00000014636
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apteryx rowi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
    Orthologs
    human mouse all
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    Genomic context

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    See AGL in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    36
    Annotation release Status Assembly Chr Location
    100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020447641.1 (45687..82054, complement)

    NW_020447641.1Genomic Context describing neighboring genes Neighboring gene ferric chelate reductase 1 Neighboring gene uncharacterized LOC112961942

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020447641 Unplaced Scaffold Reference aptRow1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 4-alpha-glucanotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables amylo-alpha-1,6-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycogen biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycogen catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycogen debranching enzyme
    Names
    amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aptRow1

    Genomic

    1. NW_020447641.1 Reference aptRow1

      Range
      45687..82054 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026057676.1 → XP_025913461.1  glycogen debranching enzyme isoform X3

      Conserved Domains (1) summary
      cl25972
      Location:22 → 1484
      GDE_C; Amylo-alpha-1,6-glucosidase

    2. XM_026057674.1 → XP_025913459.1  glycogen debranching enzyme isoform X1

      Conserved Domains (1) summary
      TIGR01531
      Location:22 → 1535
      glyc_debranch; glycogen debranching enzymye

    3. XM_026057675.1 → XP_025913460.1  glycogen debranching enzyme isoform X2

      Related
      ENSARWP00000021913.1, ENSARWT00000024834.1
      Conserved Domains (1) summary
      TIGR01531
      Location:22 → 1530
      glyc_debranch; glycogen debranching enzymye

    4. XM_026057678.1 → XP_025913463.1  glycogen debranching enzyme isoform X5

      Conserved Domains (1) summary
      cl25972
      Location:2 → 1301
      GDE_C; Amylo-alpha-1,6-glucosidase

    5. XM_026057677.1 → XP_025913462.1  glycogen debranching enzyme isoform X4

      Conserved Domains (1) summary
      cl25972
      Location:22 → 1282
      GDE_C; Amylo-alpha-1,6-glucosidase

    RNA

    1. XR_003252166.1 RNA Sequence

    2. XR_003252165.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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