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    UBQLN1 ubiquilin 1 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

    Gene ID: 102446169, updated on 10-Mar-2024

    Summary

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    Gene symbol
    UBQLN1
    Gene description
    ubiquilin 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pelodiscus sinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
    Orthologs
    human mouse all
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    Genomic context

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    See UBQLN1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005858965.1 (261710..291706, complement)

    NW_005858965.1Genomic Context describing neighboring genes Neighboring gene FERM domain containing 3 Neighboring gene IDNK gluconokinase Neighboring gene G kinase anchoring protein 1 Neighboring gene uncharacterized LOC112543533 Neighboring gene kinesin family member 27

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005858965 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables polyubiquitin modification-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquilin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PelSin_1.0 Primary Assembly

    Genomic

    1. NW_005858965.1 Reference PelSin_1.0 Primary Assembly

      Range
      261710..291706 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014579913.2 → XP_014435399.1  ubiquilin-1 isoform X2

      Conserved Domains (1) summary
      cd14399
      Location:375 → 414
      UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins

    2. XM_014579912.2 → XP_014435398.1  ubiquilin-1 isoform X1

      Conserved Domains (1) summary
      cd14399
      Location:376 → 415
      UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins
    Nucleotide Protein
    Heading Accession and Version

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