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    LOC111250031 homeobox protein orthopedia B-like [ Varroa destructor (honeybee mite) ]

    Gene ID: 111250031, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC111250031
    Gene description
    homeobox protein orthopedia B-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Varroa destructor
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Mesostigmata; Gamasina; Dermanyssoidea; Varroidae; Varroa
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    Genomic context

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    See LOC111250031 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current Vdes_3.0 (GCF_002443255.1) Unplaced Scaffold NW_019211457.1 (24068541..24106020)

    NW_019211457.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111249193 Neighboring gene transmembrane and TPR repeat-containing protein 3-like Neighboring gene acetoacetyl-CoA synthetase-like Neighboring gene NADH dehydrogenase (ubiquinone) subunit ND-42 Neighboring gene protein big brother-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019211457 Unplaced Scaffold Reference Vdes_3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein orthopedia B-like; uncharacterized protein LOC111250031

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Varroa destructor Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Vdes_3.0 Primary Assembly

    Genomic

    1. NW_019211457.1 Reference Vdes_3.0 Primary Assembly

      Range
      24068541..24106020
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022804631.1 → XP_022660366.1  uncharacterized protein LOC111250031 isoform X1

      UniProtKB/TrEMBL
      A0A7M7K1T3
      Conserved Domains (1) summary
      pfam00046
      Location:319 → 371
      Homeobox; Homeobox domain

    2. XM_022804635.1 → XP_022660370.1  homeobox protein orthopedia B-like isoform X2

      UniProtKB/TrEMBL
      A0A7M7KAM1
      Conserved Domains (1) summary
      pfam00046
      Location:74 → 126
      Homeobox; Homeobox domain

    3. XM_022804634.1 → XP_022660369.1  homeobox protein orthopedia B-like isoform X2

      UniProtKB/TrEMBL
      A0A7M7KAM1
      Conserved Domains (1) summary
      pfam00046
      Location:74 → 126
      Homeobox; Homeobox domain

    4. XM_022804633.1 → XP_022660368.1  homeobox protein orthopedia B-like isoform X2

      UniProtKB/TrEMBL
      A0A7M7KAM1
      Conserved Domains (1) summary
      pfam00046
      Location:74 → 126
      Homeobox; Homeobox domain

    5. XM_022804636.1 → XP_022660371.1  homeobox protein orthopedia B-like isoform X2

      UniProtKB/TrEMBL
      A0A7M7KAM1
      Conserved Domains (1) summary
      pfam00046
      Location:74 → 126
      Homeobox; Homeobox domain

    6. XM_022804632.1 → XP_022660367.1  homeobox protein orthopedia B-like isoform X2

      UniProtKB/TrEMBL
      A0A7M7KAM1
      Conserved Domains (1) summary
      pfam00046
      Location:74 → 126
      Homeobox; Homeobox domain

    RNA

    1. XR_002673172.1 RNA Sequence

    2. XR_002673171.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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