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    LOC110990336 sorting nexin-6-like [ Acanthaster planci (crown-of-thorns starfish) ]

    Gene ID: 110990336, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC110990336
    Gene description
    sorting nexin-6-like
    See related
    EnsemblRapid:LOC110990336
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acanthaster planci
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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    Genomic context

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    See LOC110990336 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091724.1 (69533..131704)

    NW_019091724.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase Nek9-like Neighboring gene uncharacterized LOC110990338 Neighboring gene cytoplasmic dynein 2 light intermediate chain 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019091724 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-6-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OKI-Apl_1.0 Primary Assembly

    Genomic

    1. NW_019091724.1 Reference OKI-Apl_1.0 Primary Assembly

      Range
      69533..131704
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022255279.1 → XP_022110971.1  sorting nexin-6-like isoform X2

      UniProtKB/TrEMBL
      A0A8B8A4W5
      Related
      XP_022110971.1, XM_022255279.1
      Conserved Domains (2) summary
      cd06892
      Location:29 → 169
      PX_SNX5_like; The phosphoinositide binding Phox Homology domain of Sorting Nexins 5 and 6
      cd07621
      Location:185 → 402
      BAR_SNX5_6; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 5 and 6

    2. XM_022255278.1 → XP_022110970.1  sorting nexin-6-like isoform X1

      UniProtKB/TrEMBL
      A0A8B8A1X8
      Related
      XP_022110970.1, XM_022255278.1
      Conserved Domains (2) summary
      cd06892
      Location:30 → 170
      PX_SNX5_like; The phosphoinositide binding Phox Homology domain of Sorting Nexins 5 and 6
      cd07621
      Location:186 → 403
      BAR_SNX5_6; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 5 and 6
    Nucleotide Protein
    Heading Accession and Version

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