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    Tmpo thymopoietin [ Heterocephalus glaber (naked mole-rat) ]

    Gene ID: 101723561, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Tmpo
    Gene description
    thymopoietin
    Locus tag
    GW7_08591
    See related
    Ensembl:ENSHGLG00000010848
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Heterocephalus glaber
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
    Orthologs
    human mouse all
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    Genomic context

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    See Tmpo in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624750.1 (9009085..9036713, complement)

    NW_004624750.1Genomic Context describing neighboring genes Neighboring gene IKBKB interacting protein Neighboring gene solute carrier family 25 member 3 Neighboring gene cation-dependent mannose-6-phosphate receptor-like Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene transfer RNA aspartic acid (anticodon GUC)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004624750 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    thymopoietin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HetGla_female_1.0 Primary Assembly

    Genomic

    1. NW_004624750.1 Reference HetGla_female_1.0 Primary Assembly

      Range
      9009085..9036713 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004844897.3 → XP_004844954.1  thymopoietin isoform X4

      Related
      ENSHGLP00000015146.1, ENSHGLT00000015300.1
      Conserved Domains (2) summary
      cd12940
      Location:107 → 135
      LEM_LAP2_LEMD1; LEM (Lap2/Emerin/Man1) domain found in lamina-associated polypeptide 2 (LAP2), LEM domain-containing protein 1 (LEMP-1) and similar proteins
      pfam08198
      Location:2 → 49
      Thymopoietin; Thymopoietin protein

    2. XM_004844896.3 → XP_004844953.1  thymopoietin isoform X3

      Related
      ENSHGLP00000015145.1, ENSHGLT00000015299.1
      Conserved Domains (2) summary
      cd12940
      Location:107 → 135
      LEM_LAP2_LEMD1; LEM (Lap2/Emerin/Man1) domain found in lamina-associated polypeptide 2 (LAP2), LEM domain-containing protein 1 (LEMP-1) and similar proteins
      pfam08198
      Location:2 → 49
      Thymopoietin; Thymopoietin protein

    3. XM_004844894.3 → XP_004844951.1  thymopoietin isoform X2

      Related
      ENSHGLP00000015144.1, ENSHGLT00000015298.1
      Conserved Domains (2) summary
      cd12940
      Location:107 → 135
      LEM_LAP2_LEMD1; LEM (Lap2/Emerin/Man1) domain found in lamina-associated polypeptide 2 (LAP2), LEM domain-containing protein 1 (LEMP-1) and similar proteins
      pfam08198
      Location:2 → 49
      Thymopoietin; Thymopoietin protein

    4. XM_004844893.3 → XP_004844950.1  thymopoietin isoform X1

      UniProtKB/TrEMBL
      G5B2K7
      Conserved Domains (3) summary
      cd12940
      Location:107 → 135
      LEM_LAP2_LEMD1; LEM (Lap2/Emerin/Man1) domain found in lamina-associated polypeptide 2 (LAP2), LEM domain-containing protein 1 (LEMP-1) and similar proteins
      pfam08198
      Location:2 → 49
      Thymopoietin; Thymopoietin protein
      pfam11560
      Location:454 → 685
      LAP2alpha; Lamina-associated polypeptide 2 alpha
    Nucleotide Protein
    Heading Accession and Version

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