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    TNNI3 troponin I3, cardiac type [ Sus scrofa (pig) ]

    Gene ID: 100049696, updated on 8-Mar-2024

    Summary

    Gene symbol
    TNNI3
    Gene description
    troponin I3, cardiac type
    See related
    Ensembl:ENSSSCG00000043687
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Restricted expression toward heart (RPKM 1044.6) See more
    Orthologs
    NEW
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    Genomic context

    See TNNI3 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (59366828..59377490, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 6 NC_010448.3 (54294993..54298577)

    Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 12C Neighboring gene troponin T1, slow skeletal type Neighboring gene uncharacterized LOC110261052 Neighboring gene synaptotagmin 5 Neighboring gene protein tyrosine phosphatase receptor type H

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General protein information

    Preferred Names
    troponin I, cardiac muscle
    Names
    cardiac troponin I

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001098599.1NP_001092069.1  troponin I, cardiac muscle

      See identical proteins and their annotated locations for NP_001092069.1

      Status: PROVISIONAL

      Source sequence(s)
      DQ534449
      UniProtKB/TrEMBL
      A0A8D1QKD3, A5X497, A5X5T5
      Related
      ENSSSCP00000024950.4, ENSSSCT00000026404.4
      Conserved Domains (2) summary
      pfam11636
      Location:532
      Troponin-I_N; Troponin I residues 1-32
      pfam00992
      Location:47178
      Troponin; Troponin

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

      Range
      59366828..59377490 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021093183.1XP_020948842.1  troponin I, cardiac muscle isoform X2

      UniProtKB/TrEMBL
      A0A4X1V520, A0A4X1V710, A0A8D1QKD3, A5X5T5
      Conserved Domains (2) summary
      pfam00992
      Location:47178
      Troponin
      pfam11636
      Location:132
      Troponin-I_N; Troponin I residues 1-32
    2. XM_021093181.1XP_020948840.1  troponin I, cardiac muscle isoform X1

      UniProtKB/TrEMBL
      A0A4X1V618, A0A8D1CTG8, A0A8D1DSU9, A0A8D1VB76
      Conserved Domains (1) summary
      pfam00992
      Location:86217
      Troponin
    3. XM_021093184.1XP_020948843.1  troponin I, cardiac muscle isoform X2

      UniProtKB/TrEMBL
      A0A4X1V520, A0A4X1V710, A0A8D1QKD3, A5X5T5
      Conserved Domains (2) summary
      pfam00992
      Location:47178
      Troponin
      pfam11636
      Location:132
      Troponin-I_N; Troponin I residues 1-32
    4. XM_021093180.1XP_020948839.1  troponin I, cardiac muscle isoform X1

      UniProtKB/TrEMBL
      A0A4X1V618, A0A8D1CTG8, A0A8D1DSU9, A0A8D1VB76
      Conserved Domains (1) summary
      pfam00992
      Location:86217
      Troponin