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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001244692.1 → NP_001231621.1 suppression of tumorigenicity 18 protein
See identical proteins and their annotated locations for NP_001231621.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and it encodes the same protein as variants 2 and 3.
- Source sequence(s)
-
AK122303, AK147320, BC032273
- Consensus CDS
-
CCDS14810.1
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Related
- ENSMUSP00000118322.2, ENSMUST00000140079.8
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
NM_001244693.1 → NP_001231622.1 suppression of tumorigenicity 18 protein
See identical proteins and their annotated locations for NP_001231622.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate exon in the 5' UTR, compared to variant 1. Variants 1, 2, and 3 encode the same protein.
- Source sequence(s)
-
AK122303, AK147320, BC032273
- Consensus CDS
-
CCDS14810.1
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Related
- ENSMUSP00000117789.2, ENSMUST00000131494.8
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
NM_173868.2 → NP_776293.1 suppression of tumorigenicity 18 protein
See identical proteins and their annotated locations for NP_776293.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses different sequence for its 5' UTR, compared to variant 1. Variants 1, 2, and 3 encode the same protein.
- Source sequence(s)
-
AJ536155, AK137440
- Consensus CDS
-
CCDS14810.1
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Related
- ENSMUSP00000122055.2, ENSMUST00000151281.8
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
RNA
-
NR_045188.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AJ536155
-
NR_045189.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AJ536155, BC118528
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000067.7 Reference GRCm39 C57BL/6J
- Range
-
6557455..6931164
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036164681.1 → XP_036020574.1 suppression of tumorigenicity 18 protein isoform X2
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_036164683.1 → XP_036020576.1 suppression of tumorigenicity 18 protein isoform X2
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_036164670.1 → XP_036020563.1 suppression of tumorigenicity 18 protein isoform X1
- UniProtKB/TrEMBL
-
A5LFV3
- Conserved Domains (3) summary
-
- pfam01530
Location:772 → 800
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:487 → 720
- MYT1; Myelin transcription factor 1
- cl01483
Location:928 → 1011
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_036164682.1 → XP_036020575.1 suppression of tumorigenicity 18 protein isoform X2
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Related
- ENSMUSP00000131417.3, ENSMUST00000163727.4
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_011238372.3 → XP_011236674.1 suppression of tumorigenicity 18 protein isoform X2
See identical proteins and their annotated locations for XP_011236674.1
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_030253959.1 → XP_030109819.1 suppression of tumorigenicity 18 protein isoform X1
- UniProtKB/TrEMBL
-
A5LFV3
- Conserved Domains (3) summary
-
- pfam01530
Location:772 → 800
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:487 → 720
- MYT1; Myelin transcription factor 1
- cl01483
Location:928 → 1011
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_030253967.1 → XP_030109827.1 suppression of tumorigenicity 18 protein isoform X3
- UniProtKB/TrEMBL
-
A5LFV3
- Conserved Domains (3) summary
-
- pfam01530
Location:730 → 758
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:445 → 678
- MYT1; Myelin transcription factor 1
- cl01483
Location:886 → 969
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_030253964.2 → XP_030109824.1 suppression of tumorigenicity 18 protein isoform X2
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Related
- ENSMUSP00000042056.7, ENSMUST00000043578.13
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_006495503.5 → XP_006495566.1 suppression of tumorigenicity 18 protein isoform X2
See identical proteins and their annotated locations for XP_006495566.1
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_011238371.4 → XP_011236673.1 suppression of tumorigenicity 18 protein isoform X2
See identical proteins and their annotated locations for XP_011236673.1
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_030253957.2 → XP_030109817.1 suppression of tumorigenicity 18 protein isoform X1
- UniProtKB/TrEMBL
-
A5LFV3
- Conserved Domains (3) summary
-
- pfam01530
Location:772 → 800
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:487 → 720
- MYT1; Myelin transcription factor 1
- cl01483
Location:928 → 1011
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_030253968.2 → XP_030109828.1 suppression of tumorigenicity 18 protein isoform X3
- UniProtKB/TrEMBL
-
A5LFV3
- Conserved Domains (3) summary
-
- pfam01530
Location:730 → 758
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:445 → 678
- MYT1; Myelin transcription factor 1
- cl01483
Location:886 → 969
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_030253955.2 → XP_030109815.1 suppression of tumorigenicity 18 protein isoform X1
- UniProtKB/TrEMBL
-
A5LFV3
- Conserved Domains (3) summary
-
- pfam01530
Location:772 → 800
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:487 → 720
- MYT1; Myelin transcription factor 1
- cl01483
Location:928 → 1011
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_036164684.1 → XP_036020577.1 suppression of tumorigenicity 18 protein isoform X2
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_006495501.4 → XP_006495564.1 suppression of tumorigenicity 18 protein isoform X2
See identical proteins and their annotated locations for XP_006495564.1
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_036164671.1 → XP_036020564.1 suppression of tumorigenicity 18 protein isoform X1
- UniProtKB/TrEMBL
-
A5LFV3
- Conserved Domains (3) summary
-
- pfam01530
Location:772 → 800
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:487 → 720
- MYT1; Myelin transcription factor 1
- cl01483
Location:928 → 1011
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_036164680.1 → XP_036020573.1 suppression of tumorigenicity 18 protein isoform X2
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_030253956.1 → XP_030109816.1 suppression of tumorigenicity 18 protein isoform X1
- UniProtKB/TrEMBL
-
A5LFV3
- Conserved Domains (3) summary
-
- pfam01530
Location:772 → 800
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:487 → 720
- MYT1; Myelin transcription factor 1
- cl01483
Location:928 → 1011
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_011238373.3 → XP_011236675.1 suppression of tumorigenicity 18 protein isoform X2
See identical proteins and their annotated locations for XP_011236675.1
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_030253960.1 → XP_030109820.1 suppression of tumorigenicity 18 protein isoform X1
- UniProtKB/TrEMBL
-
A5LFV3
- Conserved Domains (3) summary
-
- pfam01530
Location:772 → 800
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:487 → 720
- MYT1; Myelin transcription factor 1
- cl01483
Location:928 → 1011
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_006495504.4 → XP_006495567.1 suppression of tumorigenicity 18 protein isoform X2
See identical proteins and their annotated locations for XP_006495567.1
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_006495502.5 → XP_006495565.1 suppression of tumorigenicity 18 protein isoform X2
See identical proteins and their annotated locations for XP_006495565.1
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_030253961.2 → XP_030109821.1 suppression of tumorigenicity 18 protein isoform X2
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA
-
XM_030253963.2 → XP_030109823.1 suppression of tumorigenicity 18 protein isoform X2
- UniProtKB/Swiss-Prot
- Q3UH00, Q3URH9, Q3UVB9, Q3UZN9, Q80TY4, Q811B4, Q8K098
- UniProtKB/TrEMBL
- A5LFV3, Q148A0
- Conserved Domains (3) summary
-
- pfam01530
Location:765 → 793
- zf-C2HC; Zinc finger, C2HC type
- pfam08474
Location:480 → 713
- MYT1; Myelin transcription factor 1
- cl01483
Location:921 → 1004
- Com_YlbF; Control of competence regulator ComK, YlbF/YmcA