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    T552_00236 hypothetical protein [ Pneumocystis carinii B80 ]

    Gene ID: 28935056, updated on 17-May-2024

    Summary

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    Gene symbol
    T552_00236
    Gene description
    hypothetical protein
    Locus tag
    T552_00236
    See related
    FungiDB:T552_00236; VEuPathDB:T552_00236
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Pneumocystis carinii B80 (strain: B80, nat-host: rat)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Pneumocystidomycetes; Pneumocystidaceae; Pneumocystis
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    Genomic context

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    See T552_00236 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_017264713.1Genomic Context describing neighboring genes Neighboring gene tRNA N6-adenosine threonylcarbamoyltransferase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017264713.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_017264713.1 Reference assembly

      Range
      508880..510026 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018368854.1 → XP_018227714.1  hypothetical protein T552_00236 [Pneumocystis carinii B80]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0W4ZT96
    Nucleotide Protein
    Heading Accession and Version

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