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    LOC107850285 guanine nucleotide-binding protein subunit beta-2 [ Capsicum annuum ]

    Gene ID: 107850285, updated on 12-May-2024

    Summary

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    Gene symbol
    LOC107850285
    Gene description
    guanine nucleotide-binding protein subunit beta-2
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Capsicum annuum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
    Also known as
    Gbeta2
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    Genomic context

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    See LOC107850285 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current UCD10Xv1.1 (GCF_002878395.1) 8 NC_061118.1 (169159061..169167303, complement)
    100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 12 NC_029988.1 (40962680..40971361, complement)

    Chromosome 8 - NC_061118.1Genomic Context describing neighboring genes Neighboring gene coatomer subunit gamma Neighboring gene transcription termination factor MTEF1, chloroplastic Neighboring gene histone H3.3-like Neighboring gene glucan endo-1,3-beta-D-glucosidase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables signaling receptor complex adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of heterotrimeric G-protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    guanine nucleotide-binding protein subunit beta-2
    Names
    heterotrimeric G protein beta 2 subunit
    heterotrimeric G-protein beta subunit
    NP_001311601.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001324672.1 → NP_001311601.1  guanine nucleotide-binding protein subunit beta-2

      Status: PROVISIONAL

      Source sequence(s)
      KC875841
      UniProtKB/TrEMBL
      A0A077EUV4, A0A0B5EHM6
      Conserved Domains (3) summary
      COG2319
      Location:58 → 368
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:57 → 369
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:68 → 105
      7WD40; WD40 repeat [structural motif]

    RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCD10Xv1.1 Primary Assembly

    Genomic

    1. NC_061118.1 Reference UCD10Xv1.1 Primary Assembly

      Range
      169159061..169167303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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