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    PEX2_015940 Glycoside hydrolase family 3 [ Penicillium expansum ]

    Gene ID: 27674289, updated on 21-Dec-2023

    Summary

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    Gene symbol
    PEX2_015940
    Gene description
    Glycoside hydrolase family 3
    Locus tag
    PEX2_015940
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Penicillium expansum (strain: MD-8, nat-host: apple)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium
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    Genomic context

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    See PEX2_015940 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_015971183.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Protein of unknown function DUF2458 Neighboring gene General substrate transporter Neighboring gene Carboxylesterase, type B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015971183.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome, Transcriptome, and Functional Analyses of Penicillium expansum Provide New Insights Into Secondary Metabolism and Pathogenicity. Ballester AR, et al. Mol Plant Microbe Interact, 2015 Mar. PMID 25338147
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glucan catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Glycoside hydrolase family 3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_015971183.1 Reference assembly

      Range
      102795..105558 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016738870.1 → XP_016602387.1  Glycoside hydrolase family 3 [Penicillium expansum]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0A2J7X7
      Conserved Domains (4) summary
      COG1472
      Location:25 → 332
      BglX; Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]
      pfam01915
      Location:543 → 669
      Glyco_hydro_3_C; Glycosyl hydrolase family 3 C-terminal domain
      cl07971
      Location:9 → 250
      Glyco_hydro_3; Glycosyl hydrolase family 3 N terminal domain
      cl08459
      Location:396 → 509
      PA14; PA14 domain
    Nucleotide Protein
    Heading Accession and Version