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    PIGZ phosphatidylinositol glycan anchor biosynthesis class Z [ Ficedula albicollis (Collared flycatcher) ]

    Gene ID: 101813172, updated on 3-Aug-2024

    Summary

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    Gene symbol
    PIGZ
    Gene description
    phosphatidylinositol glycan anchor biosynthesis class Z
    See related
    Ensembl:ENSFALG00000007107
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ficedula albicollis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
    Orthologs
    human mouse all
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    Genomic context

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    See PIGZ in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current FicAlb1.5 (GCF_000247815.1) 9 NC_021681.1 (13561933..13566469, complement)

    Chromosome 9 - NC_021681.1Genomic Context describing neighboring genes Neighboring gene carboxypeptidase B1 Neighboring gene nuclear cap-binding protein subunit 2 Neighboring gene melanotransferrin Neighboring gene discs large MAGUK scaffold protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_021681.1 Chromosome 9 Reference FicAlb1.5 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-1,2-mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GPI mannosyltransferase 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference FicAlb1.5 Primary Assembly

    Genomic

    1. NC_021681.1 Reference FicAlb1.5 Primary Assembly

      Range
      13561933..13566469 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005051058.2 → XP_005051115.1  GPI mannosyltransferase 4

      UniProtKB/TrEMBL
      U3JXB2
      Related
      ENSFALP00000007416.1, ENSFALT00000007448.2
      Conserved Domains (1) summary
      cl21590
      Location:17 → 420
      PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

    RNA

    1. XR_218988.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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