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    Hmgb1-rs17 high mobility group box 1, related sequence 17 [ Mus musculus (house mouse) ]

    Gene ID: 628431, updated on 17-Aug-2024

    Summary

    Official Symbol
    Hmgb1-rs17provided by MGI
    Official Full Name
    high mobility group box 1, related sequence 17provided by MGI
    Primary source
    MGI:MGI:104764
    See related
    AllianceGenome:MGI:104764
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hmg1-rs17
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    Genomic context

    See Hmgb1-rs17 in Genome Data Viewer
    Location:
    8 A4; 8 20.5 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (33974339..33975785)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (33484311..33485757)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene purine-rich element binding protein G Neighboring gene STARR-seq mESC enhancer starr_21104 Neighboring gene STARR-seq mESC enhancer starr_21105 Neighboring gene translocase of outer mitochondrial membrane 40 homolog pseudogene Neighboring gene STARR-seq mESC enhancer starr_21108 Neighboring gene testis expressed gene 15 meiosis and synapsis associated Neighboring gene STARR-seq mESC enhancer starr_21109 Neighboring gene protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform Neighboring gene UBX domain protein 8

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033589.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC117807

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      33974339..33975785
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_001393.3: Suppressed sequence

      Description
      NG_001393.3: This RefSeq was permanently suppressed because there is sufficient evidence that this locus is transcribed.