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    EBLN3P endogenous Bornavirus like nucleoprotein 3, pseudogene [ Homo sapiens (human) ]

    Gene ID: 100506710, updated on 17-Sep-2024

    Summary

    Official Symbol
    EBLN3Pprovided by HGNC
    Official Full Name
    endogenous Bornavirus like nucleoprotein 3, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:50682
    See related
    Ensembl:ENSG00000281649 AllianceGenome:HGNC:50682
    Gene type
    pseudo
    RefSeq status
    PREDICTED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    EBLN3
    Expression
    Ubiquitous expression in lymph node (RPKM 34.1), thyroid (RPKM 25.0) and 25 other tissues See more
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    Genomic context

    See EBLN3P in Genome Data Viewer
    Location:
    9p13.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (37079896..37090401)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (37103627..37114141)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (37079893..37090398)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene paired box 5 Neighboring gene Sharpr-MPRA regulatory region 11996 Neighboring gene uncharacterized LOC105376031 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:37028766-37029440 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28373 Neighboring gene PAX5 promoter region Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28374 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19902 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28375 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28376 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:37037999-37038576 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr9:37053864-37054416 Neighboring gene MPRA-validated peak7233 silencer Neighboring gene ribosomal protein L32 pseudogene 21 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28377 Neighboring gene uncharacterized LOC105376034 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28378 Neighboring gene NANOG hESC enhancer GRCh37_chr9:37149770-37150271 Neighboring gene uncharacterized LOC105376033 Neighboring gene zinc finger CCHC-type containing 7 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:37184571-37185145

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Other Names

    • endogenous Bornavirus-like nucleoprotein 2 pseudogene

    Clone Names

    • FLJ13634, FLJ22611, FLJ34399

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_036592.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AI146982, AK091718, AL512604
      Related
      ENST00000625445.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      37079896..37090401
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      37103627..37114141
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)