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    1700001J04Rik RIKEN cDNA 1700001J04 gene [ Mus musculus (house mouse) ]

    Gene ID: 102633312, updated on 22-Oct-2024

    Summary

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    Official Symbol
    1700001J04Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700001J04 geneprovided by MGI
    Primary source
    MGI:MGI:1919075
    See related
    Ensembl:ENSMUSG00000086135 AllianceGenome:MGI:1919075
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930429E18Rik
    Expression
    Restricted expression toward testis adult (RPKM 4.0) See more
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    Genomic context

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    See 1700001J04Rik in Genome Data Viewer
    Location:
    11 E2; 11 79.65 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (114076264..114077575, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (114185438..114186749, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene sidekick cell adhesion molecule 2 Neighboring gene predicted gene, 51929 Neighboring gene RIKEN cDNA 1700025D23 gene Neighboring gene STARR-positive B cell enhancer mm9_chr11:114046847-114047148 Neighboring gene RIKEN cDNA 1700092K14 gene Neighboring gene STARR-positive B cell enhancer mm9_chr11:114070264-114070565 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:114099737-114099890 Neighboring gene predicted gene 11690

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_166725.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL645805
      Related
      ENSMUST00000315469.1

    2. NR_166726.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL645805
      Related
      ENSMUST00000126577.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      114076264..114077575 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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