U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    H2bw2 H2B.W histone 2 [ Mus musculus (house mouse) ]

    Gene ID: 69389, updated on 2-Nov-2024

    Summary

    Official Symbol
    H2bw2provided by MGI
    Official Full Name
    H2B.W histone 2provided by MGI
    Primary source
    MGI:MGI:1916639
    See related
    Ensembl:ENSMUSG00000048155 AllianceGenome:MGI:1916639
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    H2bfm; H2bfw; H2bl2; 1700014N06Rik
    Summary
    Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene encodes a replication-independent histone that is a member of the H2B histone family. [provided by RefSeq, Nov 2015]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See H2bw2 in Genome Data Viewer
    Location:
    X F1; X 59.1 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (135828074..135829122)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (136927325..136928373)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene RAB9B, member RAS oncogene family Neighboring gene predicted gene 15026 Neighboring gene glycogen synthase kinase 3 alpha pseudogene Neighboring gene thymosin beta 15b2 Neighboring gene thymosin beta 15b like

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    General gene information

    Markers

    Clone Names

    • MGC151453, MGC151457

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of chromatin ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in chromosome, telomeric region ISO
    Inferred from Sequence Orthology
    more info
     
    part_of nucleosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    histone variant H2bl2
    Names
    H2B histone family, member M

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027067.2NP_081343.1  histone variant H2bl2

      See identical proteins and their annotated locations for NP_081343.1

      Status: REVIEWED

      Source sequence(s)
      AK005982, BC117076
      Consensus CDS
      CCDS53196.1
      UniProtKB/TrEMBL
      Q9DAB5
      Related
      ENSMUSP00000055261.4, ENSMUST00000059808.5
      Conserved Domains (1) summary
      cl23830
      Location:133222
      H2B; Histone H2B

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      135828074..135829122
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)