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    Tlr2 toll-like receptor 2 [ Mus musculus (house mouse) ]

    Gene ID: 24088, updated on 29-Oct-2024

    Summary

    Official Symbol
    Tlr2provided by MGI
    Official Full Name
    toll-like receptor 2provided by MGI
    Primary source
    MGI:MGI:1346060
    See related
    Ensembl:ENSMUSG00000027995 AllianceGenome:MGI:1346060
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ly105
    Summary
    Enables several functions, including amyloid-beta binding activity; lipopeptide binding activity; and lipoteichoic acid binding activity. Involved in several processes, including microglia development; negative regulation of cellular component organization; and positive regulation of macromolecule biosynthetic process. Acts upstream of or within several processes, including positive regulation of defense response; regulation of cytokine production; and response to bacterium. Located in external side of plasma membrane. Part of Toll-like receptor 2-Toll-like receptor 6 protein complex. Is expressed in several structures, including brain; early embryo; genitourinary system; gut; and immune system. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); dermatitis (multiple); gastrointestinal system cancer (multiple); lung disease (multiple); and rhinitis (multiple). Orthologous to human TLR2 (toll like receptor 2). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Broad expression in lung adult (RPKM 3.8), bladder adult (RPKM 3.5) and 24 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tlr2 in Genome Data Viewer
    Location:
    3 E3; 3 37.4 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (83743579..83749045, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (83836272..83841824, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene secreted frizzled-related protein 2 Neighboring gene ring finger protein 175 pseudogene Neighboring gene STARR-seq mESC enhancer starr_08062 Neighboring gene STARR-seq mESC enhancer starr_08063 Neighboring gene transmembrane 131 like Neighboring gene STARR-seq mESC enhancer starr_08065 Neighboring gene STARR-positive B cell enhancer ABC_E518 Neighboring gene STARR-positive B cell enhancer ABC_E4548 Neighboring gene predicted gene, 30352

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables NAD+ nucleotidase, cyclic ADP-ribose generating IEA
    Inferred from Electronic Annotation
    more info
     
    enables Toll-like receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables amyloid-beta binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables amyloid-beta binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables diacyl lipopeptide binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables lipopeptide binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables lipopolysaccharide binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables lipoteichoic acid binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables pattern recognition receptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables pattern recognition receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables peptidoglycan binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein-containing complex binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein-containing complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables signaling receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables triacyl lipopeptide binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables triacyl lipopeptide binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables triacyl lipopeptide binding ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of ERK1 and ERK2 cascade IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in I-kappaB phosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within MyD88-dependent toll-like receptor signaling pathway IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within cell surface pattern recognition receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within cellular response to bacterial lipopeptide IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cellular response to bacterial lipopeptide TAS
    Traceable Author Statement
    more info
    PubMed 
    acts_upstream_of_or_within cellular response to diacyl bacterial lipopeptide ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to diacyl bacterial lipopeptide ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to diacyl bacterial lipopeptide ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within cellular response to lipoteichoic acid IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within cellular response to lipoteichoic acid ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to lipoteichoic acid ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within cellular response to peptidoglycan IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within cellular response to triacyl bacterial lipopeptide ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to triacyl bacterial lipopeptide ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to triacyl bacterial lipopeptide ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in cellular response to type II interferon ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in central nervous system myelin formation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of chemokine production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within defense response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within defense response to Gram-positive bacterium IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in defense response to Gram-positive bacterium ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within detection of diacyl bacterial lipopeptide ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within detection of triacyl bacterial lipopeptide ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in inflammatory response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in innate immune response TAS
    Traceable Author Statement
    more info
    PubMed 
    acts_upstream_of interleukin-17 production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of interleukin-6 production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of interleukin-6 production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in learning IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of leukocyte migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in leukotriene metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of macrophage cytokine production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of macrophage cytokine production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in microglia development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in microglial cell activation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of actin filament polymerization IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in negative regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within negative regulation of interleukin-12 production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of interleukin-17 production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of phagocytosis IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in negative regulation of phagocytosis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of synapse assembly IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of neutrophil migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of nitric oxide biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in nitric oxide metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of ERK1 and ERK2 cascade IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of NF-kappaB transcription factor activity ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of NF-kappaB transcription factor activity ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of Wnt signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cellular response to macrophage colony-stimulating factor stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of chemokine production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of chemokine production ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of cytokine production IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of gene expression ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of inflammatory response IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of inflammatory response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of interferon-beta production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of interleukin-1 beta production IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of interleukin-10 production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of interleukin-12 production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of interleukin-18 production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of interleukin-6 production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of interleukin-6 production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of interleukin-6 production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of interleukin-6 production ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of positive regulation of interleukin-8 production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of interleukin-8 production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of intracellular signal transduction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of leukocyte migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of macrophage cytokine production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of macrophage cytokine production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of matrix metallopeptidase secretion ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of neutrophil migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of nitric oxide biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of nitric-oxide synthase biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of non-canonical NF-kappaB signal transduction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of oligodendrocyte differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of tumor necrosis factor production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of tumor necrosis factor production IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of tumor necrosis factor production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of xenophagy IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within regulation of dendritic cell cytokine production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in response to bacterial lipoprotein ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within response to bacterium IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to fatty acid ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within response to molecule of fungal origin IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within response to peptidoglycan IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in toll-like receptor 2 signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in toll-like receptor TLR6:TLR2 signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in toll-like receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in toll-like receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of tumor necrosis factor production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of xenophagy IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in Golgi apparatus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of Toll-like receptor 1-Toll-like receptor 2 protein complex ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    part_of Toll-like receptor 2-Toll-like receptor 6 protein complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    part_of Toll-like receptor 2-Toll-like receptor 6 protein complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell projection ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in external side of plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane raft ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane raft ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in phagocytic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    part_of receptor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of receptor complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    toll-like receptor 2
    NP_036035.3
    XP_006501523.1
    XP_030108471.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011905.3NP_036035.3  toll-like receptor 2 precursor

      See identical proteins and their annotated locations for NP_036035.3

      Status: VALIDATED

      Source sequence(s)
      AK005043, BP771904, BY743020
      Consensus CDS
      CCDS17435.1
      UniProtKB/Swiss-Prot
      Q3U400, Q9DBC4, Q9QUN7
      UniProtKB/TrEMBL
      G3X8Y8
      Related
      ENSMUSP00000029623.10, ENSMUST00000029623.11
      Conserved Domains (7) summary
      smart00255
      Location:640784
      TIR; Toll - interleukin 1 - resistance
      cd00116
      Location:55151
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00031
      Location:5577
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:176202
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:459494
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:77135
      LRR_8; Leucine rich repeat
      cl15307
      Location:533586
      TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      83743579..83749045 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006501460.4XP_006501523.1  toll-like receptor 2 isoform X1

      UniProtKB/Swiss-Prot
      Q3U400, Q9DBC4, Q9QUN7
      Conserved Domains (7) summary
      PRK15370
      Location:350568
      PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
      smart00255
      Location:650794
      TIR; Toll - interleukin 1 - resistance
      sd00031
      Location:6587
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:186212
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:87145
      LRR_8; Leucine rich repeat
      NF033189
      Location:58259
      internalin_A; class 1 internalin InlA
      cl15307
      Location:543596
      TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
    2. XM_030252611.2XP_030108471.1  toll-like receptor 2 isoform X1

      UniProtKB/Swiss-Prot
      Q3U400, Q9DBC4, Q9QUN7
      Conserved Domains (7) summary
      PRK15370
      Location:350568
      PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
      smart00255
      Location:650794
      TIR; Toll - interleukin 1 - resistance
      sd00031
      Location:6587
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:186212
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:87145
      LRR_8; Leucine rich repeat
      NF033189
      Location:58259
      internalin_A; class 1 internalin InlA
      cl15307
      Location:543596
      TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain