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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001286245.2 → NP_001273174.1  probable E3 ubiquitin-protein ligase DTX3 isoform b
See identical proteins and their annotated locations for NP_001273174.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate exon in the 5' UTR, uses an alternate splice site in the 5' coding region, and initiates translation at an alternate upstream start codon, compared to variant 1. The encoded isoform (b) has a distinct N-terminus and is longer than isoform a.
- Source sequence(s)
-
AK094385, DA684401
- Consensus CDS
-
CCDS66410.1
- UniProtKB/Swiss-Prot
-
Q8N9I9
- Related
- ENSP00000448696.1, ENST00000551632.1
- Conserved Domains (2) summary
-
- cd16711
Location:166 → 206
- RING-HC_DTX3; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Deltex3 (DTX3) and similar proteins
- pfam18102
Location:213 → 347
- DTC; Deltex C-terminal domain
-
NM_001286246.2 → NP_001273175.1  probable E3 ubiquitin-protein ligase DTX3 isoform a
See identical proteins and their annotated locations for NP_001273175.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate exon in the 5' UTR, compared to variant 1. Both variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AK094385, DA684401
- Consensus CDS
-
CCDS41800.1
- UniProtKB/Swiss-Prot
- Q53ZZ2, Q8N9I9, Q8NAU6, Q8NDS8
- Related
- ENSP00000449294.1, ENST00000548804.5
- Conserved Domains (2) summary
-
- cd16711
Location:163 → 203
- RING-HC_DTX3; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Deltex3 (DTX3) and similar proteins
- pfam18102
Location:210 → 344
- DTC; Deltex C-terminal domain
-
NM_178502.4 → NP_848597.1  probable E3 ubiquitin-protein ligase DTX3 isoform a
See identical proteins and their annotated locations for NP_848597.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the shorter isoform (a). Both variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AK092085, AK094385
- Consensus CDS
-
CCDS41800.1
- UniProtKB/Swiss-Prot
- Q53ZZ2, Q8N9I9, Q8NAU6, Q8NDS8
- Related
- ENSP00000338050.3, ENST00000337737.8
- Conserved Domains (2) summary
-
- cd16711
Location:163 → 203
- RING-HC_DTX3; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Deltex3 (DTX3) and similar proteins
- pfam18102
Location:210 → 344
- DTC; Deltex C-terminal domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12Â Reference GRCh38.p14 Primary Assembly
- Range
-
57604824..57609802
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047428480.1 → XP_047284436.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1
-
XM_047428484.1 → XP_047284440.1  probable E3 ubiquitin-protein ligase DTX3 isoform X2
- UniProtKB/Swiss-Prot
- Q53ZZ2, Q8N9I9, Q8NAU6, Q8NDS8
- Related
- ENSP00000447873.1, ENST00000548198.5
-
XM_011538022.3 → XP_011536324.1  probable E3 ubiquitin-protein ligase DTX3 isoform X2
See identical proteins and their annotated locations for XP_011536324.1
- UniProtKB/Swiss-Prot
- Q53ZZ2, Q8N9I9, Q8NAU6, Q8NDS8
- Conserved Domains (2) summary
-
- cd16711
Location:163 → 203
- RING-HC_DTX3; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Deltex3 (DTX3) and similar proteins
- pfam18102
Location:210 → 344
- DTC; Deltex C-terminal domain
-
XM_047428479.1 → XP_047284435.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1
-
XM_047428483.1 → XP_047284439.1  probable E3 ubiquitin-protein ligase DTX3 isoform X2
- UniProtKB/Swiss-Prot
- Q53ZZ2, Q8N9I9, Q8NAU6, Q8NDS8
-
XM_024448876.2 → XP_024304644.1  probable E3 ubiquitin-protein ligase DTX3 isoform X2
- UniProtKB/Swiss-Prot
- Q53ZZ2, Q8N9I9, Q8NAU6, Q8NDS8
- Conserved Domains (2) summary
-
- cd16711
Location:163 → 203
- RING-HC_DTX3; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Deltex3 (DTX3) and similar proteins
- pfam18102
Location:210 → 344
- DTC; Deltex C-terminal domain
-
XM_005268697.2 → XP_005268754.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1
See identical proteins and their annotated locations for XP_005268754.1
- UniProtKB/Swiss-Prot
-
Q8N9I9
- Conserved Domains (2) summary
-
- cd16711
Location:166 → 206
- RING-HC_DTX3; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Deltex3 (DTX3) and similar proteins
- pfam18102
Location:213 → 347
- DTC; Deltex C-terminal domain
-
XM_005268698.2 → XP_005268755.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1
See identical proteins and their annotated locations for XP_005268755.1
- UniProtKB/Swiss-Prot
-
Q8N9I9
- Conserved Domains (2) summary
-
- cd16711
Location:166 → 206
- RING-HC_DTX3; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Deltex3 (DTX3) and similar proteins
- pfam18102
Location:213 → 347
- DTC; Deltex C-terminal domain
-
XM_047428481.1 → XP_047284437.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1
-
XM_005268703.2 → XP_005268760.1  probable E3 ubiquitin-protein ligase DTX3 isoform X2
See identical proteins and their annotated locations for XP_005268760.1
- UniProtKB/Swiss-Prot
- Q53ZZ2, Q8N9I9, Q8NAU6, Q8NDS8
- Conserved Domains (2) summary
-
- cd16711
Location:163 → 203
- RING-HC_DTX3; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Deltex3 (DTX3) and similar proteins
- pfam18102
Location:210 → 344
- DTC; Deltex C-terminal domain
-
XM_005268700.2 → XP_005268757.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1
See identical proteins and their annotated locations for XP_005268757.1
- UniProtKB/Swiss-Prot
-
Q8N9I9
- Conserved Domains (2) summary
-
- cd16711
Location:166 → 206
- RING-HC_DTX3; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Deltex3 (DTX3) and similar proteins
- pfam18102
Location:213 → 347
- DTC; Deltex C-terminal domain
-
XM_047428482.1 → XP_047284438.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1Â Alternate T2T-CHM13v2.0
- Range
-
57572308..57578021
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054371378.1 → XP_054227353.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1
-
XM_054371385.1 → XP_054227360.1  probable E3 ubiquitin-protein ligase DTX3 isoform X2
- UniProtKB/Swiss-Prot
- Q53ZZ2, Q8N9I9, Q8NAU6, Q8NDS8
-
XM_054371384.1 → XP_054227359.1  probable E3 ubiquitin-protein ligase DTX3 isoform X2
- UniProtKB/Swiss-Prot
- Q53ZZ2, Q8N9I9, Q8NAU6, Q8NDS8
-
XM_054371379.1 → XP_054227354.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1
-
XM_054371380.1 → XP_054227355.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1
-
XM_054371381.1 → XP_054227356.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1
-
XM_054371386.1 → XP_054227361.1  probable E3 ubiquitin-protein ligase DTX3 isoform X2
- UniProtKB/Swiss-Prot
- Q53ZZ2, Q8N9I9, Q8NAU6, Q8NDS8
-
XM_054371383.1 → XP_054227358.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1
-
XM_054371382.1 → XP_054227357.1  probable E3 ubiquitin-protein ligase DTX3 isoform X1