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    SNORA71C small nucleolar RNA, H/ACA box 71C [ Homo sapiens (human) ]

    Gene ID: 677839, updated on 2-Nov-2024

    Summary

    Official Symbol
    SNORA71Cprovided by HGNC
    Official Full Name
    small nucleolar RNA, H/ACA box 71Cprovided by HGNC
    Primary source
    HGNC:HGNC:32656
    See related
    Ensembl:ENSG00000201512 AllianceGenome:HGNC:32656
    Gene type
    snoRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    U71c
    Summary
    Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See SNORA71C in Genome Data Viewer
    Location:
    20q11.23
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (38429667..38429804, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (40157254..40157391, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (37058310..37058447, complement)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA host gene 17 Neighboring gene Sharpr-MPRA regulatory region 13566 Neighboring gene small nucleolar RNA, H/ACA box 71B Neighboring gene small nucleolar RNA, H/ACA box 71A Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:37059106-37059606 Neighboring gene uncharacterized LOC124904958 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17856 Neighboring gene small nucleolar RNA, H/ACA box 71D Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17857 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17858 Neighboring gene small nucleolar RNA SNORA71

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_003017.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL080249
      Related
      ENST00000364642.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      38429667..38429804 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      40157254..40157391 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)