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    1700071K01Rik RIKEN cDNA 1700071K01 gene [ Mus musculus (house mouse) ]

    Gene ID: 237880, updated on 6-Oct-2024

    Summary

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    Official Symbol
    1700071K01Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700071K01 geneprovided by MGI
    Primary source
    MGI:MGI:3588264
    See related
    AllianceGenome:MGI:3588264
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See 1700071K01Rik in Genome Data Viewer
    Location:
    11 B5; 11 49.26 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (81463328..81464365, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (81572502..81573539, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene acid-sensing ion channel 2 Neighboring gene STARR-seq mESC enhancer starr_30155 Neighboring gene STARR-seq mESC enhancer starr_30156 Neighboring gene STARR-seq mESC enhancer starr_30157 Neighboring gene predicted gene, 51910 Neighboring gene STARR-seq mESC enhancer starr_30158 Neighboring gene predicted gene, 42084 Neighboring gene STARR-seq mESC enhancer starr_30159 Neighboring gene STARR-seq mESC enhancer starr_30160 Neighboring gene STARR-seq mESC enhancer starr_30161 Neighboring gene predicted gene 11418 Neighboring gene STARR-seq mESC enhancer starr_30167 Neighboring gene STARR-seq mESC enhancer starr_30168 Neighboring gene STARR-seq mESC enhancer starr_30169 Neighboring gene RIKEN cDNA 5530401A14 gene Neighboring gene predicted gene, 46254

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The interactome of intact mitochondria by cross-linking mass spectrometry provides evidence for coexisting respiratory supercomplexes. Liu F, et al. Mol Cell Proteomics, 2018 Feb. PMID 29222160, Free PMC Article
    2. A mitochondrial protein compendium elucidates complex I disease biology. Pagliarini DJ, et al. Cell, 2008 Jul 11. PMID 18614015, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    prohibitin-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033765.2 → NP_001028937.1  prohibitin-like

      See identical proteins and their annotated locations for NP_001028937.1

      Status: PROVISIONAL

      Source sequence(s)
      AK131752
      UniProtKB/TrEMBL
      Q3V2K0
      Conserved Domains (2) summary
      smart00244
      Location:26 → 187
      PHB; prohibitin homologues
      cd03401
      Location:27 → 221
      SPFH_prohibitin; Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      81463328..81464365 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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