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    Spem1 spermatid maturation 1 [ Mus musculus (house mouse) ]

    Gene ID: 74288, updated on 2-Nov-2024

    Summary

    Official Symbol
    Spem1provided by MGI
    Official Full Name
    spermatid maturation 1provided by MGI
    Primary source
    MGI:MGI:1921538
    See related
    Ensembl:ENSMUSG00000041165 AllianceGenome:MGI:1921538
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700095G12Rik
    Summary
    Acts upstream of or within flagellated sperm motility and sperm individualization. Located in cytoplasm. Orthologous to human SPEM1 (spermatid maturation 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 659.4) See more
    Orthologs
    NEW
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    Genomic context

    See Spem1 in Genome Data Viewer
    Location:
    11 B3; 11 42.89 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (69711697..69712991, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (69820871..69822165, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene SPEM family member 3 Neighboring gene SPEM family member 2 Neighboring gene neuroligin 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:69651958-69652141 Neighboring gene transmembrane protein 256

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC118350

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in flagellated sperm motility IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within flagellated sperm motility IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in sperm individualization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within sperm individualization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within spermatogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    spermatid maturation protein 1
    Names
    sperm maturation 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028855.1NP_083131.1  spermatid maturation protein 1

      See identical proteins and their annotated locations for NP_083131.1

      Status: PROVISIONAL

      Source sequence(s)
      EF120626
      Consensus CDS
      CCDS36199.1
      UniProtKB/Swiss-Prot
      Q497J9, Q5F289, Q9D9D4
      Related
      ENSMUSP00000037500.7, ENSMUST00000045771.7
      Conserved Domains (1) summary
      pfam15670
      Location:23146
      Spem1; Spermatid maturation protein 1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      69711697..69712991 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)