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    S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834051, updated on 18-Sep-2024

    Summary

    Official Full Name
    S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
    Primary source
    TAIR:AT5G40530
    Locus tag
    AT5G40530
    See related
    Araport:AT5G40530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MNF13.4; MNF13_4
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    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (16234461..16236311)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Sucrase/ferredoxin-like family protein Neighboring gene DNA double-strand break repair protein Neighboring gene Protein kinase superfamily protein Neighboring gene tRNA-Asp

    General gene information

    NM_001344337.1
    NM_123417.4
    NM_203135.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables methylated histone binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in rDNA heterochromatin formation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    part_of chromatin silencing complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in nucleolus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     
    located_in rDNA heterochromatin ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
    NP_198869.2
    • S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-related (InterPro:IPR007823); Has 408 Blast hits to 408 proteins in 202 species: Archae - 3; Bacteria - 0; Metazoa - 110; Fungi - 140; Plants - 48; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink).
    NP_974864.1
    • S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-related (InterPro:IPR007823); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      16234461..16236311
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344336.1NP_001330531.1  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BB29
      Conserved Domains (2) summary
      COG0500
      Location:83310
      SmtA; SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
      cl17173
      Location:68310
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    2. NM_123417.4NP_198869.2  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198869.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84JC0, Q9FM44
      UniProtKB/TrEMBL
      A0A178U9J8, A0A5S9YA22
      Conserved Domains (1) summary
      cl17173
      Location:68287
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    3. NM_001344337.1NP_001330532.1  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BB31
      Conserved Domains (1) summary
      cl17173
      Location:68263
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    4. NM_203135.3NP_974864.1  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974864.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4KHE6
      Conserved Domains (2) summary
      COG0500
      Location:83299
      SmtA; SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
      cl17173
      Location:68286
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...