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    Bsph2 binder of sperm protein homolog 2 [ Mus musculus (house mouse) ]

    Gene ID: 77684, updated on 17-Aug-2024

    Summary

    Official Symbol
    Bsph2provided by MGI
    Official Full Name
    binder of sperm protein homolog 2provided by MGI
    Primary source
    MGI:MGI:1924934
    See related
    Ensembl:ENSMUSG00000078800 AllianceGenome:MGI:1924934
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Bsph2a; 9230107M04Rik
    Summary
    Enables heparin binding activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward genital fat pad adult (RPKM 28.2) See more
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    Genomic context

    See Bsph2 in Genome Data Viewer
    Location:
    7 A1; 7 7.93 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (13288791..13304992, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (13554866..13571067, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 57514 Neighboring gene predicted gene, 44254 Neighboring gene STARR-seq mESC enhancer starr_18080 Neighboring gene STARR-seq mESC enhancer starr_18081 Neighboring gene sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 5 Neighboring gene zinc finger, BED type containing 4, pseudogene 1 Neighboring gene K(lysine) acetyltransferase 6B, pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (2) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables heparin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables heparin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in sperm capacitation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cell surface IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    binder of sperm protein homolog 2
    Names
    bovine seminal plasma protein-like 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001080942.2NP_001074411.1  binder of sperm protein homolog 2 precursor

      See identical proteins and their annotated locations for NP_001074411.1

      Status: PROVISIONAL

      Source sequence(s)
      DQ664198
      Consensus CDS
      CCDS52028.1
      UniProtKB/Swiss-Prot
      Q0Q236
      Related
      ENSMUSP00000104166.3, ENSMUST00000108526.6
      Conserved Domains (2) summary
      pfam00040
      Location:85126
      fn2; Fibronectin type II domain
      cl09951
      Location:4077
      FN2; Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      13288791..13304992 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)