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    NET1 neuroepithelial cell transforming 1 [ Gallus gallus (chicken) ]

    Gene ID: 416693, updated on 10-Oct-2024

    Summary

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    Official Symbol
    NET1provided by CGNC
    Official Full Name
    neuroepithelial cell transforming 1provided by CGNC
    Primary source
    CGNC:6397
    See related
    Ensembl:ENSGALG00010006853
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See NET1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (1675662..1727670, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (1681747..1733747, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box containing 13 Neighboring gene calmodulin like 3 Neighboring gene tubulin alpha like 3 Neighboring gene tubulin alpha-3 chain-like Neighboring gene urocortin 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of Rho protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neuroepithelial cell-transforming gene 1 protein
    Names
    neuroepithelial cell transforming gene 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030648.2 → NP_001025819.1  neuroepithelial cell-transforming gene 1 protein

      See identical proteins and their annotated locations for NP_001025819.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000006
      UniProtKB/TrEMBL
      A0A8V0XWB9, Q5ZJM0
      Related
      ENSGALP00010009308.1, ENSGALT00010016310.1
      Conserved Domains (3) summary
      smart00325
      Location:124 → 300
      RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
      cd13224
      Location:314 → 448
      PH_Net1; Neuroepithelial cell transforming 1 Pleckstrin homology (PH) domain
      pfam00169
      Location:333 → 447
      PH; PH domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1675662..1727670 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015284280.3 → XP_015139766.1  neuroepithelial cell-transforming gene 1 protein isoform X1

      UniProtKB/TrEMBL
      A0A8V0XRJ2, A0A8V0XZ88
      Related
      ENSGALP00010009314.1, ENSGALT00010016334.1
      Conserved Domains (3) summary
      smart00325
      Location:177 → 353
      RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
      cd13224
      Location:367 → 501
      PH_Net1; Neuroepithelial cell transforming 1 Pleckstrin homology (PH) domain
      pfam00169
      Location:386 → 500
      PH; PH domain

    2. XM_015284331.4 → XP_015139817.2  neuroepithelial cell-transforming gene 1 protein isoform X2

      UniProtKB/TrEMBL
      A0A8V0XRI8
      Related
      ENSGALP00010009309.1, ENSGALT00010016316.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1681747..1733747 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046907029.1 → XP_046762985.1  neuroepithelial cell-transforming gene 1 protein isoform X1

      UniProtKB/TrEMBL
      A0A8V0XRJ2

    2. XM_046907028.1 → XP_046762984.1  neuroepithelial cell-transforming gene 1 protein isoform X3

    3. XM_046907030.1 → XP_046762986.1  neuroepithelial cell-transforming gene 1 protein isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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