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    TCTEX1D2 Tctex1 domain containing 2 [ Gallus gallus (chicken) ]

    Gene ID: 424914, updated on 17-Aug-2024

    Summary

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    Symbol
    TCTEX1D2provided by CGNC
    Full Name
    Tctex1 domain containing 2provided by CGNC
    Primary source
    CGNC:52284
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TCTEX1D2 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (14594032..14604267)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (14390069..14400312)

    Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene receptor transporter protein 2 Neighboring gene programmed cell death 1 Neighboring gene phosphate cytidylyltransferase 1, choline, alpha Neighboring gene uncharacterized LOC100857766 Neighboring gene solute carrier family 51 subunit alpha

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynein intermediate chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cytoplasmic dynein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tctex1 domain-containing protein 2; dynein light chain Tctex-type protein 2B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      14594032..14604267
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046898489.1 → XP_046754445.1  dynein light chain Tctex-type protein 2B

    2. XM_422724.7 → XP_422724.1  dynein light chain Tctex-type protein 2B

      UniProtKB/TrEMBL
      R4GKS8
      Conserved Domains (1) summary
      cd21459
      Location:23 → 126
      DLC-like_TCTEX1D2; dynein light chain (DLC)-like domain found in Tctex1 domain-containing protein 2 (TCTEX1D2) and similar proteins

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      14390069..14400312
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046924043.1 → XP_046779999.1  dynein light chain Tctex-type protein 2B

    2. XM_040678640.2 → XP_040534574.1  dynein light chain Tctex-type protein 2B

      Conserved Domains (1) summary
      cd21459
      Location:23 → 126
      DLC-like_TCTEX1D2; dynein light chain (DLC)-like domain found in Tctex1 domain-containing protein 2 (TCTEX1D2) and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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