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    CHTF8 chromosome transmission fidelity factor 8 [ Gallus gallus (chicken) ]

    Gene ID: 769609, updated on 17-Aug-2024

    Summary

    Symbol
    CHTF8provided by CGNC
    Full Name
    chromosome transmission fidelity factor 8provided by CGNC
    Primary source
    CGNC:55390
    See related
    Ensembl:ENSGALG00010008163
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
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    Genomic context

    See CHTF8 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (18560310..18561997, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (18908299..18909986, complement)

    Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene transmembrane and coiled-coil domains 7 Neighboring gene hyaluronan synthase 3 Neighboring gene UTP4, small subunit processome component Neighboring gene syntrophin beta 2

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    chromosome transmission fidelity protein 8 homolog
    Names
    CTF8, chromosome transmission fidelity factor 8 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277638.2NP_001264567.1  chromosome transmission fidelity protein 8 homolog

      See identical proteins and their annotated locations for NP_001264567.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) is a protein-coding transcript of this gene. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      JAENSK010000248
      UniProtKB/TrEMBL
      F1NU26
      Related
      ENSGALP00010011028.1, ENSGALT00010019480.1
      Conserved Domains (1) summary
      pfam09696
      Location:19104
      Ctf8; Ctf8
    2. NM_001277645.2NP_001264574.1  chromosome transmission fidelity protein 8 homolog

      See identical proteins and their annotated locations for NP_001264574.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      JAENSK010000248
      UniProtKB/TrEMBL
      F1NU26
      Conserved Domains (1) summary
      pfam09696
      Location:19104
      Ctf8; Ctf8

    RNA

    1. NR_102418.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) lacks an alternate intron compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      BU255592, CR352955, CR354334
    2. NR_102419.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) uses an alternate first exon and lacks an alternate intron compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      CR354334, CR406334

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      18560310..18561997 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040707142.2XP_040563076.1  chromosome transmission fidelity protein 8 homolog isoform X2

      Conserved Domains (1) summary
      pfam09696
      Location:4589
      Ctf8
    2. XM_046899537.1XP_046755493.1  chromosome transmission fidelity protein 8 homolog isoform X2

    3. XM_015292612.4XP_015148098.1  chromosome transmission fidelity protein 8 homolog isoform X1

      UniProtKB/TrEMBL
      F1NU26
      Conserved Domains (1) summary
      pfam09696
      Location:19104
      Ctf8; Ctf8
    4. XM_046899536.1XP_046755492.1  chromosome transmission fidelity protein 8 homolog isoform X2

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      18908299..18909986 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046925716.1XP_046781672.1  chromosome transmission fidelity protein 8 homolog isoform X2

    2. XM_046925718.1XP_046781674.1  chromosome transmission fidelity protein 8 homolog isoform X2

    3. XM_046925715.1XP_046781671.1  chromosome transmission fidelity protein 8 homolog isoform X1

      UniProtKB/TrEMBL
      F1NU26
    4. XM_046925717.1XP_046781673.1  chromosome transmission fidelity protein 8 homolog isoform X2