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    USP43 ubiquitin specific peptidase 43 [ Gallus gallus (chicken) ]

    Gene ID: 101751148, updated on 17-Aug-2024

    Summary

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    Official Symbol
    USP43provided by CGNC
    Official Full Name
    ubiquitin specific peptidase 43provided by CGNC
    Primary source
    CGNC:70578
    See related
    Ensembl:ENSGALG00010029928
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See USP43 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (2828832..2837185)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (2432030..2440421)

    Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 24L Neighboring gene cilia and flagella associated protein 52 Neighboring gene Rho GTPase activating protein 44 Neighboring gene CMT1A duplicated region transcript 1 Neighboring gene trans-golgi network vesicle protein 23 homolog B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin carboxyl-terminal hydrolase 43

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2828832..2837185
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040649642.1 → XP_040505576.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X1

      Conserved Domains (1) summary
      cd02674
      Location:517 → 706
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    2. XM_040649644.1 → XP_040505578.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X3

      Conserved Domains (1) summary
      cd02674
      Location:517 → 705
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    3. XM_040649643.1 → XP_040505577.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X2

      Conserved Domains (1) summary
      cd02674
      Location:517 → 688
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    4. XM_040649646.1 → XP_040505580.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X5

      Conserved Domains (1) summary
      cd02674
      Location:517 → 687
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    5. XM_040649645.1 → XP_040505579.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X4

      Conserved Domains (1) summary
      cd02674
      Location:486 → 675
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    6. XM_040649647.1 → XP_040505581.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X7

      Conserved Domains (1) summary
      cd02674
      Location:517 → 706
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    7. XM_025141829.3 → XP_024997597.2  ubiquitin carboxyl-terminal hydrolase 43 isoform X6

      UniProtKB/TrEMBL
      A0A8V1ANZ1
      Related
      ENSGALP00010044801.1, ENSGALT00010072334.1
      Conserved Domains (2) summary
      PHA03378
      Location:679 → 853
      PHA03378; EBNA-3B; Provisional
      COG5560
      Location:87 → 665
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2432030..2440421
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040686857.1 → XP_040542791.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X1

      Conserved Domains (1) summary
      cd02674
      Location:518 → 707
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    2. XM_040686859.1 → XP_040542793.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X3

      Conserved Domains (1) summary
      cd02674
      Location:518 → 706
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    3. XM_040686858.1 → XP_040542792.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X2

      Conserved Domains (1) summary
      cd02674
      Location:518 → 689
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    4. XM_040686861.1 → XP_040542795.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X5

      Conserved Domains (1) summary
      cd02674
      Location:518 → 688
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    5. XM_040686860.1 → XP_040542794.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X4

      Conserved Domains (1) summary
      cd02674
      Location:487 → 676
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    6. XM_040686863.1 → XP_040542797.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X7

      Conserved Domains (1) summary
      cd02674
      Location:518 → 707
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    7. XM_040686862.2 → XP_040542796.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X6

      UniProtKB/TrEMBL
      A0A8V1ANZ1
      Conserved Domains (2) summary
      PHA03378
      Location:679 → 853
      PHA03378; EBNA-3B; Provisional
      COG5560
      Location:87 → 665
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

    8. XM_040686864.2 → XP_040542798.1  ubiquitin carboxyl-terminal hydrolase 43 isoform X8

      UniProtKB/TrEMBL
      A0A8V1ANZ1
      Conserved Domains (2) summary
      PHA03378
      Location:661 → 835
      PHA03378; EBNA-3B; Provisional
      COG5560
      Location:87 → 647
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein Strain
    Heading Accession and Version

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