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    LYPD6 LY6/PLAUR domain containing 6 [ Gallus gallus (chicken) ]

    Gene ID: 771649, updated on 17-Aug-2024

    Summary

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    Symbol
    LYPD6provided by CGNC
    Full Name
    LY6/PLAUR domain containing 6provided by CGNC
    Primary source
    CGNC:9471
    See related
    Ensembl:ENSGALG00010009591
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See LYPD6 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (34485964..34526952)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (34419439..34444765)

    Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 5C Neighboring gene LY6/PLAUR domain containing 6B Neighboring gene methylmalonic aciduria and homocystinuria, cblD type Neighboring gene microRNA 1c

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acetylcholine receptor inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ly6/PLAUR domain-containing protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      34485964..34526952
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046944172.1 → XP_046800128.1  ly6/PLAUR domain-containing protein 6

      UniProtKB/TrEMBL
      A0A8V0Y4C4

    2. XM_001234905.6 → XP_001234906.1  ly6/PLAUR domain-containing protein 6

      See identical proteins and their annotated locations for XP_001234906.1

      UniProtKB/TrEMBL
      A0A8V0Y4C4
      Related
      ENSGALP00010013201.1, ENSGALT00010022850.1
      Conserved Domains (1) summary
      pfam16975
      Location:41 → 145
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

    3. XM_040704389.2 → XP_040560323.1  ly6/PLAUR domain-containing protein 6

      UniProtKB/TrEMBL
      A0A8V0Y4C4
      Conserved Domains (1) summary
      pfam16975
      Location:41 → 145
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

    4. XM_046944173.1 → XP_046800129.1  ly6/PLAUR domain-containing protein 6

      UniProtKB/TrEMBL
      A0A8V0Y4C4

    5. XM_015289872.4 → XP_015145358.1  ly6/PLAUR domain-containing protein 6

      UniProtKB/TrEMBL
      A0A8V0Y4C4
      Conserved Domains (1) summary
      pfam16975
      Location:41 → 145
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      34419439..34444765
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046921704.1 → XP_046777660.1  ly6/PLAUR domain-containing protein 6

      UniProtKB/TrEMBL
      A0A8V0Y4C4

    2. XM_040677071.2 → XP_040533005.1  ly6/PLAUR domain-containing protein 6

      UniProtKB/TrEMBL
      A0A8V0Y4C4
      Conserved Domains (1) summary
      pfam16975
      Location:41 → 145
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

    3. XM_040677072.2 → XP_040533006.1  ly6/PLAUR domain-containing protein 6

      UniProtKB/TrEMBL
      A0A8V0Y4C4
      Conserved Domains (1) summary
      pfam16975
      Location:41 → 145
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6

    4. XM_040677069.2 → XP_040533003.1  ly6/PLAUR domain-containing protein 6

      UniProtKB/TrEMBL
      A0A8V0Y4C4
      Conserved Domains (1) summary
      pfam16975
      Location:41 → 145
      UPAR_LY6_2; Ly6/PLAUR domain-containing protein 6, Lypd6
    Nucleotide Protein
    Heading Accession and Version

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