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    RBM18 RNA binding motif protein 18 [ Gallus gallus (chicken) ]

    Gene ID: 417111, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RBM18provided by CGNC
    Official Full Name
    RNA binding motif protein 18provided by CGNC
    Primary source
    CGNC:918
    See related
    Ensembl:ENSGALG00010028355
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RBM18 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (9343105..9353887, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (8753638..8764459, complement)

    Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit A8 Neighboring gene MORN repeat containing 5 Neighboring gene LIM homeobox 6 Neighboring gene uncharacterized LOC107052228 Neighboring gene mitochondrial ribosome recycling factor Neighboring gene prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable RNA-binding protein 18

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      9343105..9353887 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_415396.8 → XP_415396.1  probable RNA-binding protein 18

      See identical proteins and their annotated locations for XP_415396.1

      UniProtKB/TrEMBL
      A0A8V1ADH0
      Related
      ENSGALP00010042215.1, ENSGALT00010068691.1
      Conserved Domains (2) summary
      COG0724
      Location:1 → 162
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12355
      Location:26 → 105
      RRM_RBM18; RNA recognition motif (RRM) found in eukaryotic RNA-binding protein 18 and similar proteins

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      8753638..8764459 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040685512.2 → XP_040541446.1  probable RNA-binding protein 18

      UniProtKB/TrEMBL
      A0A8V1ADH0
      Conserved Domains (2) summary
      COG0724
      Location:1 → 162
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12355
      Location:26 → 105
      RRM_RBM18; RNA recognition motif (RRM) found in eukaryotic RNA-binding protein 18 and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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