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    a4gnt.L alpha-1,4-N-acetylglucosaminyltransferase L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 734685, updated on 18-Sep-2024

    Summary

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    Official Symbol
    a4gnt.L
    Official Full Name
    alpha-1,4-N-acetylglucosaminyltransferase L homeolog
    Primary source
    Xenbase:XB-GENE-5796042
    Locus tag
    XELAEV_18038374mg
    See related
    EnsemblRapid:ENSXLAG00005023598
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    a4gnt
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    Genomic context

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    See a4gnt.L in Genome Data Viewer
    Location:
    chromosome: 8L
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (6948272..6959989, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (6826392..6838147, complement)

    Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD24 Neighboring gene ribosomal protein L7a L homeolog Neighboring gene mediator complex subunit 22 L homeolog Neighboring gene surfeit 6 L homeolog Neighboring gene ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) gene 2 L homeolog Neighboring gene histo-blood group ABO system transferase-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC116495

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables acetylglucosaminyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hexosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein O-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    alpha-1,4-N-acetylglucosaminyltransferase L homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001096156.1 → NP_001089625.1  alpha-1,4-N-acetylglucosaminyltransferase L homeolog precursor

      See identical proteins and their annotated locations for NP_001089625.1

      Status: PROVISIONAL

      Source sequence(s)
      BC099303
      UniProtKB/TrEMBL
      A0A974C647, Q4KLB8
      Related
      ENSXLAP00005069817.1, ENSXLAT00005071351.1
      Conserved Domains (2) summary
      pfam04572
      Location:202 → 326
      Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
      cl19952
      Location:65 → 177
      Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      6948272..6959989 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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