U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    chchd3.S coiled-coil-helix-coiled-coil-helix domain containing 3 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 379142, updated on 18-Sep-2024

    Summary

    Official Symbol
    chchd3.S
    Official Full Name
    coiled-coil-helix-coiled-coil-helix domain containing 3 S homeolog
    Primary source
    Xenbase:XB-GENE-17335295
    Locus tag
    XELAEV_18020891mg
    See related
    EnsemblRapid:ENSXLAG00005008068
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See chchd3.S in Genome Data Viewer
    Location:
    chromosome: 3S
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (65512616..65547192)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (64094031..64128702)

    Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108713036 Neighboring gene exocyst complex component 4-like Neighboring gene plexin A4 S homeolog Neighboring gene uncharacterized LOC108713038 Neighboring gene uncharacterized LOC121402178

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC53617

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within inner mitochondrial membrane organization IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of MICOS complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC379142

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001085986.1NP_001079455.1  uncharacterized protein LOC379142

      See identical proteins and their annotated locations for NP_001079455.1

      Status: PREDICTED

      Source sequence(s)
      BC042358
      UniProtKB/TrEMBL
      A0A974D862, Q7ZYP1
      Related
      ENSXLAP00005023126.1, ENSXLAT00005023831.1
      Conserved Domains (1) summary
      pfam05300
      Location:15194
      DUF737; Protein of unknown function (DUF737)

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      65512616..65547192
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)