U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MGC69154 uncharacterized protein MGC69154 [ Xenopus laevis (African clawed frog) ]

    Gene ID: 379587, updated on 3-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    MGC69154
    Gene description
    uncharacterized protein MGC69154
    Locus tag
    XELAEV_18008662mg
    See related
    EnsemblRapid:ENSXLAG00005000462
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MGC69154 in Genome Data Viewer
    Location:
    chromosome: 1S
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (300693..319499)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (290469..307647)

    Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene polycomb group ring finger 1 S homeolog Neighboring gene coiled-coil domain-containing protein 142 Neighboring gene WW domain binding protein 1 S homeolog Neighboring gene INO80 complex subunit B S homeolog

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The termination of UHRF1-dependent PAF15 ubiquitin signaling is regulated by USP7 and ATAD5. Miyashita R, et al. Elife, 2023 Feb 3. PMID 36734974, Free PMC Article
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC379587

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001086428.1 → NP_001079897.1  uncharacterized protein LOC379587

      See identical proteins and their annotated locations for NP_001079897.1

      Status: PREDICTED

      Source sequence(s)
      BC056125
      UniProtKB/TrEMBL
      A0A974DR74, Q7T0M4
      Related
      ENSXLAP00005001290.1, ENSXLAT00005001330.1
      Conserved Domains (1) summary
      smart00544
      Location:132 → 243
      MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      300693..319499
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041572910.1 → XP_041428844.1  uncharacterized protein LOC379587 isoform X1

      UniProtKB/TrEMBL
      A0A8J1LID9, A0A974DR74
      Related
      ENSXLAP00005001294.1, ENSXLAT00005001334.1
      Conserved Domains (1) summary
      smart00544
      Location:345 → 458
      MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials