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    sdhd.S succinate dehydrogenase complex subunit D, integral membrane protein S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 494586, updated on 18-Sep-2024

    Summary

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    Official Symbol
    sdhd.S
    Official Full Name
    succinate dehydrogenase complex subunit D, integral membrane protein S homeolog
    Primary source
    Xenbase:XB-GENE-6255924
    Locus tag
    XELAEV_18037435mg
    See related
    EnsemblRapid:ENSXLAG00005008550
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    pgl; cbt1; pgl1; sdh4; sdhd; CybS-A; sdhd-a; sdhd-b
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    Genomic context

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    See sdhd.S in Genome Data Viewer
    Location:
    chromosome: 7S
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (73907690..73912844)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (54875548..54880649)

    Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121396479 Neighboring gene cilia- and flagella-associated protein 251-like Neighboring gene translocase of inner mitochondrial membrane 8 homolog B S homeolog Neighboring gene interleukin 18 gene 2 S homeolog Neighboring gene interleukin 18 gene 1 S homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables heme binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables succinate dehydrogenase (quinone) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ubiquinone binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ubiquinone binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within mitochondrial electron transport, succinate to ubiquinone IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrial envelope IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrial inner membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of respiratory chain complex II (succinate dehydrogenase) ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    succinate dehydrogenase [ubiquinone] cytochrome b small subunit A, mitochondrial
    Names
    Succinate dehydrogenase complex subunit D-A
    Succinate-ubiquinone oxidoreductase cytochrome b small subunit A
    Succinate-ubiquinone reductase membrane anchor subunit A
    malate dehydrogenase [quinone] cytochrome b small subunit
    succinate dehydrogenase complex, subunit D, integral membrane protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001094474.1 → NP_001087943.1  succinate dehydrogenase [ubiquinone] cytochrome b small subunit A, mitochondrial

      See identical proteins and their annotated locations for NP_001087943.1

      Status: PROVISIONAL

      Source sequence(s)
      BC077454
      UniProtKB/Swiss-Prot
      Q6AZR3
      UniProtKB/TrEMBL
      A0A974CC37
      Related
      ENSXLAP00005024726.1, ENSXLAT00005025435.1
      Conserved Domains (1) summary
      cd03496
      Location:53 → 151
      SQR_TypeC_CybS; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. Eukaryotic SQRs reduce high potential quinones such as ubiquinone. SQR is also called succinate dehydrogenase or Complex II, and is part of the citric ...

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      73907690..73912844
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018226975.2 → XP_018082464.1  succinate dehydrogenase [ubiquinone] cytochrome b small subunit A, mitochondrial isoform X1

      UniProtKB/Swiss-Prot
      Q6AZR3
      UniProtKB/TrEMBL
      A0A974CC37
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6AZR3.1 GenPept UniProtKB/Swiss-Prot:Q6AZR3

    Gene LinkOut

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    Research Materials