U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    dpm2.S dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 494631, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    dpm2.S
    Official Full Name
    dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit S homeolog
    Primary source
    Xenbase:XB-GENE-6255622
    Locus tag
    XELAEV_18041705mg
    See related
    EnsemblRapid:ENSXLAG00005014258
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    dpm2; dpm2b; dpm2-a; dpm2-b
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See dpm2.S in Genome Data Viewer
    Location:
    chromosome: 8S
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8S NC_054386.1 (35408018..35411781)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8S NC_030739.1 (35115153..35119004)

    Chromosome 8S - NC_054386.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 S homeolog Neighboring gene collagen, type XXVII, alpha 1 S homeolog Neighboring gene phosphatidylinositol-4-phosphate 5-kinase-like 1 S homeolog Neighboring gene alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables enzyme regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within dolichol metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of dolichol-phosphate-mannose synthase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit S homeolog
    Names
    dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit b

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001171707.1 → NP_001165178.1  dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit S homeolog

      See identical proteins and their annotated locations for NP_001165178.1

      Status: PROVISIONAL

      Source sequence(s)
      BC082204
      UniProtKB/TrEMBL
      Q641S3
      Related
      ENSXLAP00005041809.1, ENSXLAT00005042836.1
      Conserved Domains (1) summary
      pfam07297
      Location:5 → 80
      DPM2; Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2)

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054386.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      35408018..35411781
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.