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    dnaja2.S DnaJ heat shock protein family (Hsp40) member A2 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 380317, updated on 18-Sep-2024

    Summary

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    Official Symbol
    dnaja2.S
    Official Full Name
    DnaJ heat shock protein family (Hsp40) member A2 S homeolog
    Primary source
    Xenbase:XB-GENE-17336209
    Locus tag
    XELAEV_18025031mg
    See related
    EnsemblRapid:ENSXLAG00005017724
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    dj3; cpr3; dja2; dnaj; dnj3; rdj2; dnaja2; hirip4
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    Genomic context

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    See dnaja2.S in Genome Data Viewer
    Location:
    chromosome: 4S
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (57683284..57697807)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (51497088..51511612)

    Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene integrin alpha FG-GAP repeat containing 1 S homeolog Neighboring gene neuropilin and tolloid like 2 S homeolog Neighboring gene cell division cycle associated 9 S homeolog Neighboring gene glutamic-pyruvate transaminase (alanine aminotransferase) 2 S homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC64385

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables Hsp70 protein binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein-folding chaperone binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein folding IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to heat IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DnaJ subfamily A member 2
    Names
    DnaJ (Hsp40) homolog, subfamily A, member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001087156.2 → NP_001080625.1  DnaJ subfamily A member 2

      See identical proteins and their annotated locations for NP_001080625.1

      Status: PROVISIONAL

      Source sequence(s)
      BC053791
      UniProtKB/TrEMBL
      A0A974CYV8, Q7SZ94
      Related
      ENSXLAP00005052344.1, ENSXLAT00005053508.1
      Conserved Domains (4) summary
      cd10719
      Location:142 → 208
      DnaJ_zf; Zinc finger domain of DnaJ and HSP40
      cd10747
      Location:113 → 339
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
      PTZ00037
      Location:1 → 410
      PTZ00037; DnaJ_C chaperone protein; Provisional
      pfam00226
      Location:9 → 67
      DnaJ; DnaJ domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      57683284..57697807
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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