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    acp1.S acid phosphatase 1 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 378647, updated on 18-Sep-2024

    Summary

    Official Symbol
    acp1.S
    Official Full Name
    acid phosphatase 1 S homeolog
    Primary source
    Xenbase:XB-GENE-973009
    Locus tag
    XELAEV_18030034mg
    See related
    EnsemblRapid:ENSXLAG00005023099
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    acp1; haap; acp1a; ptp1a; XLPTP1; acp1-a; acp1-b; acp1.L; LMW-PTP; ptp1a-A
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    Genomic context

    See acp1.S in Genome Data Viewer
    Location:
    chromosome: 5S
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5S NC_054380.1 (121222144..121237721)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5S NC_030733.1 (114522018..114537595)

    Chromosome 5S - NC_054380.1Genomic Context describing neighboring genes Neighboring gene F-box protein 25 S homeolog Neighboring gene family with sequence similarity 110 member C S homeolog Neighboring gene ALK and LTK ligand 2 S homeolog Neighboring gene transmembrane protein 18 S homeolog

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC80022

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables acid phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables non-membrane spanning protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphoprotein phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    acid phosphatase 1 S homeolog
    Names
    acid phosphatase 1 L homeolog
    acid phosphatase 1, soluble L homeolog
    acid phosphatase 1, soluble a
    low molecular weight protein tyrosine phosphatase 1a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001085856.1NP_001079325.1  acid phosphatase 1 S homeolog isoform a

      See identical proteins and their annotated locations for NP_001079325.1

      Status: PROVISIONAL

      Source sequence(s)
      AY039214
      UniProtKB/TrEMBL
      Q8UWG5
      Related
      ENSXLAP00005068070.1, ENSXLAT00005069605.1
      Conserved Domains (1) summary
      cd16343
      Location:8156
      LMWPTP; Low molecular weight protein tyrosine phosphatase
    2. NM_001114769.1NP_001108241.1  acid phosphatase 1 S homeolog isoform b

      See identical proteins and their annotated locations for NP_001108241.1

      Status: PROVISIONAL

      Source sequence(s)
      BC070999
      UniProtKB/TrEMBL
      A0A974CUG2, Q8UWG4
      Related
      ENSXLAP00005068101.1, ENSXLAT00005069635.1
      Conserved Domains (1) summary
      cd16343
      Location:8156
      LMWPTP; Low molecular weight protein tyrosine phosphatase

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054380.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      121222144..121237721
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)