clpp.L caseinolytic mitochondrial matrix peptidase proteolytic subunit L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: clpp.L
Official Full Name: caseinolytic mitochondrial matrix peptidase proteolytic subunit L homeolog
Primary source: Xenbase:XB-GENE-969411
Locus tag: XELAEV_18019106mg
See related: EnsemblRapid:ENSXLAG00005002036
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: clpp
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Genomic context

Location:: chromosome: 3L

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3L	NC_054375.1 (150530088..150536441, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3L	NC_030728.1 (133634170..133640515, complement)

Chromosome 3L - NC_054375.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables ATP-dependent peptidase activity	IEA Inferred from Electronic Annotation more info
enables ATPase binding	IEA Inferred from Electronic Annotation more info
enables serine-type endopeptidase activity	IEA Inferred from Electronic Annotation more info
enables serine-type peptidase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within protein quality control for misfolded or incompletely synthesized proteins	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within proteolysis	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of endopeptidase Clp complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: caseinolytic mitochondrial matrix peptidase proteolytic subunit L homeolog

Names: ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001095347.1 → NP_001088816.1 caseinolytic mitochondrial matrix peptidase proteolytic subunit L homeolog

See identical proteins and their annotated locations for NP_001088816.1

Status: PROVISIONAL

Source sequence(s)

BC106236

UniProtKB/TrEMBL

A0A974DG57, Q3KQF3, Q5PPT3

Related

ENSXLAP00005006124.1, ENSXLAT00005006230.1

Conserved Domains (1) summary

PRK00277
Location:29 → 225

clpP; ATP-dependent Clp protease proteolytic subunit; Reviewed

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

150530088..150536441 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)