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    FOXF1 forkhead box F1 [ Gallus gallus (chicken) ]

    Gene ID: 395624, updated on 17-Aug-2024

    Summary

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    Symbol
    FOXF1provided by CGNC
    Full Name
    forkhead box F1provided by CGNC
    Primary source
    CGNC:49408
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See FOXF1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (17037792..17042385, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (17385284..17389891, complement)

    Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene forkhead box C2 Neighboring gene methenyltetrahydrofolate synthetase domain containing Neighboring gene uncharacterized LOC112533263 Neighboring gene uncharacterized LOC112533292

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Coelom formation: binary decision of the lateral plate mesoderm is controlled by the ectoderm. Funayama N, et al. Development, 1999 Sep. PMID 10457021
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in animal organ morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein F1
    Names
    forkhead transcription factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      17037792..17042385 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_414186.8 → XP_414186.5  forkhead box protein F1

      UniProtKB/TrEMBL
      A0A8V0XN14
      Conserved Domains (1) summary
      cd20049
      Location:80 → 178
      FH_FOXF1; Forkhead (FH) domain found in Forkhead box protein F1 (FOXF1) and similar proteins

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      17385284..17389891 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040681104.2 → XP_040537038.1  forkhead box protein F1

      UniProtKB/TrEMBL
      A0A8V0XN14
      Conserved Domains (1) summary
      cd20049
      Location:80 → 178
      FH_FOXF1; Forkhead (FH) domain found in Forkhead box protein F1 (FOXF1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials