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    MIR325HG MIR325 host gene [ Homo sapiens (human) ]

    Gene ID: 101928469, updated on 17-Sep-2024

    Summary

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    Official Symbol
    MIR325HGprovided by HGNC
    Official Full Name
    MIR325 host geneprovided by HGNC
    Primary source
    HGNC:HGNC:50346
    See related
    Ensembl:ENSG00000280870 AllianceGenome:HGNC:50346
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MIR384HG
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See MIR325HG in Genome Data Viewer
    Location:
    Xq13.3-q21.1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (76657798..77014532, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (75091609..75448375, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (75878199..76234957, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex 13 pseudogene 1 Neighboring gene RNA, 5S ribosomal pseudogene 508 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:75945635-75946136 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:75946137-75946636 Neighboring gene microRNA 384 Neighboring gene microRNA 325 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:76266438-76266938 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:76266939-76267439 Neighboring gene uncharacterized LOC105373254 Neighboring gene RNA, 5S ribosomal pseudogene 509

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Other Names

    • MIR325 host gene (non-protein coding)

    Clone Names

    • FLJ25017

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110400.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript.
      Source sequence(s)
      AK057746, AK311342, DB170434

    2. NR_110401.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an exon but contains a different internal exon, resulting in a shorter transcript, compared to variant 1.
      Source sequence(s)
      AK057746, AK311342, DA217157, DA389464

    3. NR_110402.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) lacks an exon and contains a different internal exon, resulting in a shorter transcript, compared to variant 1.
      Source sequence(s)
      AK057746, AK311342, DA286367
      Related
      ENST00000630388.2

    4. NR_110403.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) lacks an exon and contains a different internal exon, resulting in a shorter transcript, compared to variant 1.
      Source sequence(s)
      AK057746, AK311342, DA286367

    5. NR_110404.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5) lacks an internal exon, resulting in a shorter transcript, compared to variant 1.
      Source sequence(s)
      AK057746, AK311342, DA388267

    6. NR_110405.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (6) lacks two exons but contains a different internal exon, resulting in a shorter transcript, compared to variant 1.
      Source sequence(s)
      AK057746, AK311342, DA300762

    7. NR_110406.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (7) lacks two exons but contains a different internal exon, resulting in a shorter transcript, compared to variant 1.
      Source sequence(s)
      AK057746, AK311342, DA256943

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      76657798..77014532 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      75091609..75448375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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