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    UBBP2 ubiquitin B pseudogene 2 [ Homo sapiens (human) ]

    Gene ID: 23668, updated on 17-Sep-2024

    Summary

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    Official Symbol
    UBBP2provided by HGNC
    Official Full Name
    ubiquitin B pseudogene 2provided by HGNC
    Primary source
    HGNC:HGNC:12465
    See related
    AllianceGenome:HGNC:12465
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See UBBP2 in Genome Data Viewer
    Location:
    1q41
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (217850259..217850731, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (217091056..217091529, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (218023601..218024073, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:217610119-217610638 Neighboring gene Sharpr-MPRA regulatory region 1921 Neighboring gene G-patch domain containing 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1818 Neighboring gene Sharpr-MPRA regulatory region 7160 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2537 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2538 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:217833249-217834448 Neighboring gene spermatogenesis associated 17 Neighboring gene SPATA17 antisense RNA 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:218074629-218075249 Neighboring gene uncharacterized LOC105372922 Neighboring gene long intergenic non-protein coding RNA 210 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:218138659-218139159 Neighboring gene VISTA enhancer hs1257 Neighboring gene long intergenic non-protein coding RNA 1653

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The human ubiquitin gene family: structure of a gene and pseudogenes from the Ub B subfamily. Baker RT, et al. Nucleic Acids Res, 1987 Jan 26. PMID 3029682, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_002287.4 

      Range
      101..573
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      217850259..217850731 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      217091056..217091529 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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