NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_017005.2 RefSeqGene
- Range
-
4809..178085
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001177704.3 → NP_001171175.1 FRAS1-related extracellular matrix protein 1 isoform 2
See identical proteins and their annotated locations for NP_001171175.1
Status: REVIEWED
- Source sequence(s)
-
AL390732, AL512643
- Consensus CDS
-
CCDS55293.1
- UniProtKB/Swiss-Prot
-
Q5H8C1
- Related
- ENSP00000370278.1, ENST00000380894.5
- Conserved Domains (3) summary
-
- smart00034
Location:589 → 711
- CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
- pfam16184
Location:25 → 134
- Cadherin_3; Cadherin-like
- cl02522
Location:282 → 365
- Calx-beta; Calx-beta domain
-
NM_001370058.2 → NP_001356987.1 FRAS1-related extracellular matrix protein 1 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AL390732, AL512643
- Conserved Domains (1) summary
-
- cl02522
Location:282 → 340
- Calx-beta; Calx-beta domain
-
NM_001370060.1 → NP_001356989.1 FRAS1-related extracellular matrix protein 1 isoform 4 precursor
Status: REVIEWED
- Source sequence(s)
-
AL354672, AL512643
- Conserved Domains (1) summary
-
- pfam16184
Location:324 → 400
- Cadherin_3; Cadherin-like
-
NM_001370061.2 → NP_001356990.1 FRAS1-related extracellular matrix protein 1 isoform 2
Status: REVIEWED
- Source sequence(s)
-
AL390732, AL512643
- Consensus CDS
-
CCDS55293.1
- Conserved Domains (3) summary
-
- smart00034
Location:589 → 711
- CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
- pfam16184
Location:25 → 134
- Cadherin_3; Cadherin-like
- cl02522
Location:282 → 365
- Calx-beta; Calx-beta domain
-
NM_001370063.1 → NP_001356992.1 FRAS1-related extracellular matrix protein 1 isoform 5 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (6), as well as variant 7, encodes isoform 5.
- Source sequence(s)
-
AL354672, AL512643
- Conserved Domains (1) summary
-
- pfam16184
Location:315 → 391
- Cadherin_3; Cadherin-like
-
NM_001370065.1 → NP_001356994.1 FRAS1-related extracellular matrix protein 1 isoform 5 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (7), as well as variant 6, encodes isoform 5.
- Source sequence(s)
-
AL354672, AL512643
- Conserved Domains (1) summary
-
- pfam16184
Location:315 → 391
- Cadherin_3; Cadherin-like
-
NM_001379081.2 → NP_001366010.1 FRAS1-related extracellular matrix protein 1 isoform 1 precursor
Status: REVIEWED
- Source sequence(s)
-
AL354672, AL390732, AL512643
- Consensus CDS
-
CCDS47952.1
- UniProtKB/Swiss-Prot
- B7ZBX4, Q5H8C1, Q5VV00, Q5VV01, Q6MZI4, Q8NEG9, Q96LI3
- Related
- ENSP00000370262.3, ENST00000380880.4
- Conserved Domains (3) summary
-
- smart00034
Location:2053 → 2175
- CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
- pfam16184
Location:1489 → 1598
- Cadherin_3; Cadherin-like
- cl02522
Location:1746 → 1829
- Calx-beta; Calx-beta domain
-
NM_144966.7 → NP_659403.4 FRAS1-related extracellular matrix protein 1 isoform 1 precursor
See identical proteins and their annotated locations for NP_659403.4
Status: REVIEWED
- Source sequence(s)
-
AL354672, AL390732, AL512643
- Consensus CDS
-
CCDS47952.1
- UniProtKB/Swiss-Prot
- B7ZBX4, Q5H8C1, Q5VV00, Q5VV01, Q6MZI4, Q8NEG9, Q96LI3
- Conserved Domains (3) summary
-
- smart00034
Location:2053 → 2175
- CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
- pfam16184
Location:1489 → 1598
- Cadherin_3; Cadherin-like
- cl02522
Location:1746 → 1829
- Calx-beta; Calx-beta domain
RNA
-
NR_163238.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL354672, AL390732, AL512643
- Related
-
ENST00000380875.7
-
NR_163239.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL354672, AL390732, AL512643
-
NR_163240.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL354672, AL512643
-
NR_163241.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL354672, AL512643
-
NR_163242.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL390732, AL512643
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000009.12 Reference GRCh38.p14 Primary Assembly
- Range
-
14737152..14910995 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047422844.1 → XP_047278800.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_047422847.1 → XP_047278803.1 FRAS1-related extracellular matrix protein 1 isoform X2
- UniProtKB/Swiss-Prot
- B7ZBX4, Q5H8C1, Q5VV00, Q5VV01, Q6MZI4, Q8NEG9, Q96LI3
-
XM_017014322.2 → XP_016869811.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_047422846.1 → XP_047278802.1 FRAS1-related extracellular matrix protein 1 isoform X2
- UniProtKB/Swiss-Prot
- B7ZBX4, Q5H8C1, Q5VV00, Q5VV01, Q6MZI4, Q8NEG9, Q96LI3
-
XM_017014321.3 → XP_016869810.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_017014324.3 → XP_016869813.1 FRAS1-related extracellular matrix protein 1 isoform X3
-
XM_017014325.3 → XP_016869814.1 FRAS1-related extracellular matrix protein 1 isoform X4
-
XM_017014316.3 → XP_016869805.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_047422848.1 → XP_047278804.1 FRAS1-related extracellular matrix protein 1 isoform X2
- UniProtKB/Swiss-Prot
- B7ZBX4, Q5H8C1, Q5VV00, Q5VV01, Q6MZI4, Q8NEG9, Q96LI3
-
XM_017014320.3 → XP_016869809.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_017014319.3 → XP_016869808.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_047422845.1 → XP_047278801.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_017014326.2 → XP_016869815.1 FRAS1-related extracellular matrix protein 1 isoform X5
-
XM_017014327.3 → XP_016869816.1 FRAS1-related extracellular matrix protein 1 isoform X6
-
XM_006716729.4 → XP_006716792.1 FRAS1-related extracellular matrix protein 1 isoform X19
See identical proteins and their annotated locations for XP_006716792.1
- UniProtKB/Swiss-Prot
-
Q5H8C1
- Conserved Domains (3) summary
-
- smart00034
Location:589 → 711
- CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
- pfam16184
Location:25 → 134
- Cadherin_3; Cadherin-like
- cl02522
Location:282 → 365
- Calx-beta; Calx-beta domain
-
XM_047422859.1 → XP_047278815.1 FRAS1-related extracellular matrix protein 1 isoform X20
-
XM_011517758.3 → XP_011516060.1 FRAS1-related extracellular matrix protein 1 isoform X18
- Conserved Domains (3) summary
-
- smart00034
Location:601 → 723
- CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
- pfam16184
Location:115 → 273
- Cadherin_3; Cadherin-like
- cl02522
Location:294 → 377
- Calx-beta; Calx-beta domain
-
XM_017014329.3 → XP_016869818.1 FRAS1-related extracellular matrix protein 1 isoform X8
-
XM_017014328.3 → XP_016869817.1 FRAS1-related extracellular matrix protein 1 isoform X7
-
XM_047422852.1 → XP_047278808.1 FRAS1-related extracellular matrix protein 1 isoform X12
-
XM_047422851.1 → XP_047278807.1 FRAS1-related extracellular matrix protein 1 isoform X11
-
XM_047422850.1 → XP_047278806.1 FRAS1-related extracellular matrix protein 1 isoform X10
-
XM_047422849.1 → XP_047278805.1 FRAS1-related extracellular matrix protein 1 isoform X9
-
XM_047422854.1 → XP_047278810.1 FRAS1-related extracellular matrix protein 1 isoform X14
-
XM_047422853.1 → XP_047278809.1 FRAS1-related extracellular matrix protein 1 isoform X13
-
XM_047422858.1 → XP_047278814.1 FRAS1-related extracellular matrix protein 1 isoform X17
-
XM_047422857.1 → XP_047278813.1 FRAS1-related extracellular matrix protein 1 isoform X17
-
XM_047422856.1 → XP_047278812.1 FRAS1-related extracellular matrix protein 1 isoform X17
-
XM_047422855.1 → XP_047278811.1 FRAS1-related extracellular matrix protein 1 isoform X15
-
XM_017014330.3 → XP_016869819.1 FRAS1-related extracellular matrix protein 1 isoform X16
- UniProtKB/TrEMBL
-
F8WE85
Alternate T2T-CHM13v2.0
Genomic
-
NC_060933.1 Alternate T2T-CHM13v2.0
- Range
-
14746865..14921449 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054362116.1 → XP_054218091.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_054362110.1 → XP_054218085.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_054362111.1 → XP_054218086.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_054362115.1 → XP_054218090.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_054362118.1 → XP_054218093.1 FRAS1-related extracellular matrix protein 1 isoform X2
-
XM_054362117.1 → XP_054218092.1 FRAS1-related extracellular matrix protein 1 isoform X2
-
XM_054362114.1 → XP_054218089.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_054362120.1 → XP_054218095.1 FRAS1-related extracellular matrix protein 1 isoform X3
-
XM_054362121.1 → XP_054218096.1 FRAS1-related extracellular matrix protein 1 isoform X4
-
XM_054362109.1 → XP_054218084.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_054362119.1 → XP_054218094.1 FRAS1-related extracellular matrix protein 1 isoform X2
-
XM_054362113.1 → XP_054218088.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_054362112.1 → XP_054218087.1 FRAS1-related extracellular matrix protein 1 isoform X1
-
XM_054362122.1 → XP_054218097.1 FRAS1-related extracellular matrix protein 1 isoform X5
-
XM_054362123.1 → XP_054218098.1 FRAS1-related extracellular matrix protein 1 isoform X6
-
XM_054362138.1 → XP_054218113.1 FRAS1-related extracellular matrix protein 1 isoform X19
-
XM_054362139.1 → XP_054218114.1 FRAS1-related extracellular matrix protein 1 isoform X20
-
XM_054362137.1 → XP_054218112.1 FRAS1-related extracellular matrix protein 1 isoform X18
-
XM_054362125.1 → XP_054218100.1 FRAS1-related extracellular matrix protein 1 isoform X8
-
XM_054362124.1 → XP_054218099.1 FRAS1-related extracellular matrix protein 1 isoform X7
-
XM_054362129.1 → XP_054218104.1 FRAS1-related extracellular matrix protein 1 isoform X12
-
XM_054362128.1 → XP_054218103.1 FRAS1-related extracellular matrix protein 1 isoform X11
-
XM_054362127.1 → XP_054218102.1 FRAS1-related extracellular matrix protein 1 isoform X10
-
XM_054362126.1 → XP_054218101.1 FRAS1-related extracellular matrix protein 1 isoform X9
-
XM_054362131.1 → XP_054218106.1 FRAS1-related extracellular matrix protein 1 isoform X14
-
XM_054362130.1 → XP_054218105.1 FRAS1-related extracellular matrix protein 1 isoform X13
-
XM_054362136.1 → XP_054218111.1 FRAS1-related extracellular matrix protein 1 isoform X17
-
XM_054362135.1 → XP_054218110.1 FRAS1-related extracellular matrix protein 1 isoform X17
-
XM_054362134.1 → XP_054218109.1 FRAS1-related extracellular matrix protein 1 isoform X17
-
XM_054362132.1 → XP_054218107.1 FRAS1-related extracellular matrix protein 1 isoform X15
-
XM_054362133.1 → XP_054218108.1 FRAS1-related extracellular matrix protein 1 isoform X16