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    CG43078 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38981, updated on 2-Nov-2024

    Summary

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    Official Symbol
    CG43078provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0262508
    Locus tag
    Dmel_CG43078
    See related
    AllianceGenome:FB:FBgn0262508
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG17926; CG32352; CG32353; CG32355; CG6239; Dmel\CG43078; lincRNA.473
    Old locus tag
    Dmel_CG32352; Dmel_CG32353; Dmel_CG32355
    Summary
    Is expressed in adult head; adult heart; and larval muscle system. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    all
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    Genomic context

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    See CG43078 in Genome Data Viewer
    Location:
    66D7-66D8; 3-26 cM
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (8576808..8599617)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (8569908..8592717)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene rhea Neighboring gene mir-190 stem loop Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Negative elongation factor E Neighboring gene Ribosomal protein L14

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conservation of gene order, structure and sequence between three closely linked genes in Drosophila melanogaster and Drosophila virilis. Lyamouri M, et al. Gene, 2002 Jan 9. PMID 11814692
    2. Drosophila Ionotropic Receptor 25a mediates circadian clock resetting by temperature. Chen C, et al. Nature, 2015 Nov 26. PMID 26580016
    3. In Depth Exploration of the Alternative Proteome of Drosophila melanogaster. Fabre B, et al. Front Cell Dev Biol, 2022. PMID 35721519, Free PMC Article
    4. Editor's Highlight: Genetic Targets of Acute Toluene Inhalation in Drosophila melanogaster. Bushnell PJ, et al. Toxicol Sci, 2017 Mar 1. PMID 28013218, Free PMC Article
    5. Unraveling the Genetic Basis for the Rapid Diversification of Male Genitalia between Drosophila Species. Hagen JFD, et al. Mol Biol Evol, 2021 Jan 23. PMID 32931587, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG43078-PA
    CG43078-PB
    CG43078-PC
    CG43078-PD
    CG43078-PE
    CG43078-PG
    CG43078-PH
    CG43078-PI
    CG43078-PJ
    CG43078-PK
    CG43078-PL
    CG43078-PM
    CG43078-PN

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      8576808..8599617
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300057.1 → NP_001286986.1  uncharacterized protein Dmel_CG43078, isoform N [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286986.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NF47

    2. NM_001274661.1 → NP_001261590.1  uncharacterized protein Dmel_CG43078, isoform K [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261590.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PET1

    3. NM_001259751.1 → NP_001246680.1  uncharacterized protein Dmel_CG43078, isoform J [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246680.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NF47

    4. NM_001259749.1 → NP_001246678.1  uncharacterized protein Dmel_CG43078, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246678.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NFP8

    5. NM_001274662.1 → NP_001261591.1  uncharacterized protein Dmel_CG43078, isoform L [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261591.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PHT9

    6. NM_001274663.1 → NP_001261592.1  uncharacterized protein Dmel_CG43078, isoform M [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261592.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PBX1

    7. NM_001169908.2 → NP_001163379.1  uncharacterized protein Dmel_CG43078, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163379.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5BHY8
      Conserved Domains (1) summary
      PTZ00341
      Location:637 → 753
      PTZ00341; Ring-infected erythrocyte surface antigen; Provisional

    8. NM_001169909.1 → NP_001163380.1  uncharacterized protein Dmel_CG43078, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163380.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E1JI71, Q7YTY0

    9. NM_168278.3 → NP_729389.1  uncharacterized protein Dmel_CG43078, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729389.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YTY0, Q9VSM0
      Related
      FBpp0293349

    10. NM_168279.3 → NP_729390.1  uncharacterized protein Dmel_CG43078, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729390.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YTY0, Q9VSM1
      Related
      FBpp0293347

    11. NM_001259750.1 → NP_001246679.1  uncharacterized protein Dmel_CG43078, isoform I [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246679.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9ND64

    12. NM_170629.3 → NP_729391.1  uncharacterized protein Dmel_CG43078, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729391.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VSM2
      Related
      FBpp0293348
      Conserved Domains (1) summary
      PTZ00341
      Location:54 → 170
      PTZ00341; Ring-infected erythrocyte surface antigen; Provisional

    13. NM_001259748.2 → NP_001246677.1  uncharacterized protein Dmel_CG43078, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246677.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NE59
      Conserved Domains (1) summary
      PHA03247
      Location:436 → 613
      PHA03247; large tegument protein UL36; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E1JI71 E1JI71
    M9ND64 M9ND64
    M9NE59 M9NE59
    M9NF47 M9NF47
    M9NFP8 M9NFP8
    M9PBX1 M9PBX1
    M9PET1 M9PET1
    M9PHT9 M9PHT9
    Q5BHY8 Q5BHY8
    Q7YTY0 Q7YTY0
    Q8MZ46 Q8MZ46
    Q95RZ5 Q95RZ5
    Q9VSM0 Q9VSM0
    Q9VSM1 Q9VSM1
    Q9VSM2 Q9VSM2

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