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    Luzp2 leucine zipper protein 2 [ Mus musculus (house mouse) ]

    Gene ID: 233271, updated on 28-Oct-2024

    Summary

    Official Symbol
    Luzp2provided by MGI
    Official Full Name
    leucine zipper protein 2provided by MGI
    Primary source
    MGI:MGI:1889615
    See related
    Ensembl:ENSMUSG00000063297 AllianceGenome:MGI:1889615
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D130073E01; 9330154K17Rik
    Summary
    Predicted to be located in extracellular region. Is expressed in diencephalon lateral wall ventricular layer; midbrain ventricular layer; pons marginal layer; and pons ventricular layer. Orthologous to human LUZP2 (leucine zipper protein 2). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Biased expression in frontal lobe adult (RPKM 21.2), cortex adult (RPKM 13.6) and 4 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Luzp2 in Genome Data Viewer
    Location:
    7 B5; 7 33.23 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (54484936..54918636)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (54835245..55268888)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene Mrps33 pseudogene Neighboring gene predicted gene 6290 Neighboring gene STARR-seq mESC enhancer starr_18947 Neighboring gene STARR-seq mESC enhancer starr_18948 Neighboring gene nucleolin pseudogene Neighboring gene predicted gene, 24116 Neighboring gene STARR-seq mESC enhancer starr_18949 Neighboring gene STARR-seq mESC enhancer starr_18950 Neighboring gene STARR-seq mESC enhancer starr_18951 Neighboring gene STARR-seq mESC enhancer starr_18952 Neighboring gene ribosomal protein S7 pseudogene Neighboring gene STARR-seq mESC enhancer starr_18954 Neighboring gene predicted gene, 26482

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    leucine zipper protein 2
    Names
    leucine zipper motif 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178705.5NP_848820.4  leucine zipper protein 2 precursor

      See identical proteins and their annotated locations for NP_848820.4

      Status: VALIDATED

      Source sequence(s)
      AC102117, AC116953, BC075646
      Consensus CDS
      CCDS39970.1
      UniProtKB/Swiss-Prot
      Q7TPB5, Q8BGY3, Q8CBZ7
      Related
      ENSMUSP00000080979.7, ENSMUST00000082373.8
      Conserved Domains (1) summary
      COG1196
      Location:21208
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      54484936..54918636
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006540826.5XP_006540889.1  leucine zipper protein 2 isoform X1

      Conserved Domains (1) summary
      pfam05622
      Location:5128
      HOOK; HOOK protein