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    Meikin meiotic kinetochore factor [ Mus musculus (house mouse) ]

    Gene ID: 74847, updated on 2-Nov-2024

    Summary

    Official Symbol
    Meikinprovided by MGI
    Official Full Name
    meiotic kinetochore factorprovided by MGI
    Primary source
    MGI:MGI:1922097
    See related
    Ensembl:ENSMUSG00000020332 AllianceGenome:MGI:1922097
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930404A10Rik
    Summary
    Acts upstream of or within meiotic chromosome segregation and meiotic sister chromatid cohesion. Located in kinetochore. Is expressed in seminiferous tubule. Orthologous to human MEIKIN (meiotic kinetochore factor). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 2.0) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Meikin in Genome Data Viewer
    Location:
    11 B1.3; 11 32.13 cM
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (54261478..54317616)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (54370652..54426790)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_29507 Neighboring gene predicted gene, 51861 Neighboring gene acyl-CoA synthetase long-chain family member 6 Neighboring gene predicted gene 12224 Neighboring gene mucolipin 2 pseudogene Neighboring gene oxidative stress responsive 1 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E6983 Neighboring gene predicted gene, 57579 Neighboring gene folliculin interacting protein 1 Neighboring gene predicted gene, 24198 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:54336045-54336232 Neighboring gene STARR-positive B cell enhancer ABC_E6984 Neighboring gene Rap guanine nucleotide exchange factor (GEF) 6 Neighboring gene STARR-seq mESC enhancer starr_29509

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1)  1 citation

    General gene information

    Markers

    Clone Names

    • MGC130346

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in condensed chromosome, centromeric region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in kinetochore IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    meiosis-specific kinetochore protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029105.3NP_083381.1  meiosis-specific kinetochore protein

      See identical proteins and their annotated locations for NP_083381.1

      Status: VALIDATED

      Source sequence(s)
      AL596127
      Consensus CDS
      CCDS48798.1
      UniProtKB/Swiss-Prot
      Q3KNB2, Q5F2C3
      Related
      ENSMUSP00000091745.3, ENSMUST00000094193.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      54261478..54317616
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)