U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Grm3 glutamate receptor, metabotropic 3 [ Mus musculus (house mouse) ]

    Gene ID: 108069, updated on 2-Nov-2024

    Summary

    Official Symbol
    Grm3provided by MGI
    Official Full Name
    glutamate receptor, metabotropic 3provided by MGI
    Primary source
    MGI:MGI:1351340
    See related
    Ensembl:ENSMUSG00000003974 AllianceGenome:MGI:1351340
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    mGlu3; Gprc1c; mGluR3; 0710001G23Rik
    Summary
    Enables calcium channel regulator activity and group II metabotropic glutamate receptor activity. Involved in postsynaptic modulation of chemical synaptic transmission. Acts upstream of or within gene expression. Located in several cellular components, including axon; dendritic spine; and postsynaptic density. Is active in glutamatergic synapse; postsynaptic membrane; and presynaptic membrane. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; immune system; and visual system. Orthologous to human GRM3 (glutamate metabotropic receptor 3). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in cortex adult (RPKM 11.5), frontal lobe adult (RPKM 9.3) and 4 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Grm3 in Genome Data Viewer
    Location:
    5 A1; 5 3.69 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (9535235..9776087, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (9485236..9725352, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene endosome-lysosome associated apoptosis and autophagy regulator family member 2 Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 14B pseudogene Neighboring gene STARR-seq mESC enhancer starr_12413 Neighboring gene STARR-seq mESC enhancer starr_12414 Neighboring gene microRNA 879 Neighboring gene STARR-seq mESC enhancer starr_12415 Neighboring gene STARR-seq mESC enhancer starr_12416 Neighboring gene STARR-seq mESC enhancer starr_12417 Neighboring gene predicted gene, 23312 Neighboring gene predicted gene, 35139

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (6)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in astrocyte projection ISO
    Inferred from Sequence Orthology
    more info
     
    located_in axon IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in axon ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dendritic spine IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in glutamatergic synapse EXP
    Inferred from Experiment
    more info
    PubMed 
    is_active_in glutamatergic synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in neuron projection IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in postsynaptic density IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in postsynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in postsynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in presynaptic active zone NAS
    Non-traceable Author Statement
    more info
    PubMed 
    is_active_in presynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in presynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    metabotropic glutamate receptor 3
    Names
    G protein-coupled receptor, family C, group 1, member C

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001417964.1NP_001404893.1  metabotropic glutamate receptor 3 precursor

      Status: VALIDATED

      Source sequence(s)
      AC157555, AC162520
      UniProtKB/Swiss-Prot
      Q14DJ9, Q9QYS2
    2. NM_181850.3NP_862898.1  metabotropic glutamate receptor 3 precursor

      See identical proteins and their annotated locations for NP_862898.1

      Status: VALIDATED

      Source sequence(s)
      AC157555, AC162520
      Consensus CDS
      CCDS19090.1
      UniProtKB/Swiss-Prot
      Q14DJ9, Q9QYS2
      Related
      ENSMUSP00000004076.4, ENSMUST00000004076.5
      Conserved Domains (3) summary
      cd15448
      Location:575828
      7tmC_mGluR3; metabotropic glutamate receptor 3 in group 2, member of the class C family of seven-transmembrane G protein-coupled receptors
      cd06375
      Location:33494
      PBP1_mGluR_groupII; ligand binding domain of the group II metabotropic glutamate receptor
      pfam07562
      Location:505555
      NCD3G; Nine Cysteines Domain of family 3 GPCR

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      9535235..9776087 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036164718.1XP_036020611.1  metabotropic glutamate receptor 3 isoform X1

      UniProtKB/Swiss-Prot
      Q14DJ9, Q9QYS2
      Conserved Domains (3) summary
      cd15448
      Location:575828
      7tmC_mGluR3; metabotropic glutamate receptor 3 in group 2, member of the class C family of seven-transmembrane G protein-coupled receptors
      cd06375
      Location:33494
      PBP1_mGluR_groupII; ligand binding domain of the group II metabotropic glutamate receptor
      pfam07562
      Location:505555
      NCD3G; Nine Cysteines Domain of family 3 GPCR
    2. XM_036164719.1XP_036020612.1  metabotropic glutamate receptor 3 isoform X1

      UniProtKB/Swiss-Prot
      Q14DJ9, Q9QYS2
      Conserved Domains (3) summary
      cd15448
      Location:575828
      7tmC_mGluR3; metabotropic glutamate receptor 3 in group 2, member of the class C family of seven-transmembrane G protein-coupled receptors
      cd06375
      Location:33494
      PBP1_mGluR_groupII; ligand binding domain of the group II metabotropic glutamate receptor
      pfam07562
      Location:505555
      NCD3G; Nine Cysteines Domain of family 3 GPCR
    3. XM_036164720.1XP_036020613.1  metabotropic glutamate receptor 3 isoform X1

      UniProtKB/Swiss-Prot
      Q14DJ9, Q9QYS2
      Conserved Domains (3) summary
      cd15448
      Location:575828
      7tmC_mGluR3; metabotropic glutamate receptor 3 in group 2, member of the class C family of seven-transmembrane G protein-coupled receptors
      cd06375
      Location:33494
      PBP1_mGluR_groupII; ligand binding domain of the group II metabotropic glutamate receptor
      pfam07562
      Location:505555
      NCD3G; Nine Cysteines Domain of family 3 GPCR