NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001290475.1 → NP_001277404.1 tudor domain-containing protein 7 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AK077641, AK150077, BB619178, BC029689, BY427120, CX563409, CX563831, CX568265
- Consensus CDS
-
CCDS71381.1
- UniProtKB/TrEMBL
-
A0A0A0MQD1
- Related
- ENSMUSP00000103406.3, ENSMUST00000107777.9
- Conserved Domains (5) summary
-
- cd04508
Location:728 → 773
- TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
- cd09973
Location:256 → 322
- LOTUS_2_TDRD7; The second LOTUS domain on Tudor-containing protein 7 (TDRD7)
- cd09974
Location:361 → 425
- LOTUS_3_TDRD7; The third LOTUS domain on Tudor-containing protein 7 (TDRD7)
- cd09986
Location:38 → 124
- LOTUS_1_TDRD7; The first LOTUS domain on Tudor-containing protein 7 (TDRD7)
- pfam00567
Location:932 → 1047
- TUDOR; Tudor domain
-
NM_001355189.1 → NP_001342118.1 tudor domain-containing protein 7 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region and initiates translation at a downstream start codon, compared to variant 1. It encodes isoform 2, which has a shorter N-terminus, compared to isoform 1. Variants 2 and 3 encode the same isoform (2).
- Source sequence(s)
-
AK161319, BE950089, BY427120, CF736406, CN539534, CX566254
- Consensus CDS
-
CCDS18142.1
- UniProtKB/Swiss-Prot
- B1AWG7, B1AWH5, Q8K1H1, Q8R181
- Conserved Domains (4) summary
-
- cd09973
Location:223 → 289
- LOTUS_2_TDRD7; The second LOTUS domain on Tudor-containing protein 7 (TDRD7)
- cd09974
Location:328 → 392
- LOTUS_3_TDRD7; The third LOTUS domain on Tudor-containing protein 7 (TDRD7)
- cd09986
Location:5 → 91
- LOTUS_1_TDRD7; The first LOTUS domain on Tudor-containing protein 7 (TDRD7)
- pfam00567
Location:903 → 1013
- TUDOR; Tudor domain
-
NM_146142.2 → NP_666254.1 tudor domain-containing protein 7 isoform 2
See identical proteins and their annotated locations for NP_666254.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region and initiates translation at a downstream start codon, compared to variant 1. It encodes isoform 2, which has a shorter N-terminus, compared to isoform 1. Variants 2 and 3 encode the same isoform (2).
- Source sequence(s)
-
BC029689, BY427120, BY783424
- Consensus CDS
-
CCDS18142.1
- UniProtKB/Swiss-Prot
- B1AWG7, B1AWH5, Q8K1H1, Q8R181
- Related
- ENSMUSP00000099993.2, ENSMUST00000102929.2
- Conserved Domains (4) summary
-
- cd09973
Location:223 → 289
- LOTUS_2_TDRD7; The second LOTUS domain on Tudor-containing protein 7 (TDRD7)
- cd09974
Location:328 → 392
- LOTUS_3_TDRD7; The third LOTUS domain on Tudor-containing protein 7 (TDRD7)
- cd09986
Location:5 → 91
- LOTUS_1_TDRD7; The first LOTUS domain on Tudor-containing protein 7 (TDRD7)
- pfam00567
Location:903 → 1013
- TUDOR; Tudor domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000070.7 Reference GRCm39 C57BL/6J
- Range
-
45965335..46034766
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006537518.2 → XP_006537581.1 tudor domain-containing protein 7 isoform X2
- Conserved Domains (4) summary
-
- cd09973
Location:256 → 322
- LOTUS_2_TDRD7; The second LOTUS domain on Tudor-containing protein 7 (TDRD7)
- cd09974
Location:361 → 425
- LOTUS_3_TDRD7; The third LOTUS domain on Tudor-containing protein 7 (TDRD7)
- cd09986
Location:38 → 124
- LOTUS_1_TDRD7; The first LOTUS domain on Tudor-containing protein 7 (TDRD7)
- pfam00567
Location:676 → 795
- TUDOR; Tudor domain
-
XM_030253050.2 → XP_030108910.1 tudor domain-containing protein 7 isoform X3
- Conserved Domains (4) summary
-
- cd09973
Location:223 → 289
- LOTUS_2_TDRD7; The second LOTUS domain on Tudor-containing protein 7 (TDRD7)
- cd09974
Location:328 → 392
- LOTUS_3_TDRD7; The third LOTUS domain on Tudor-containing protein 7 (TDRD7)
- cd09986
Location:5 → 91
- LOTUS_1_TDRD7; The first LOTUS domain on Tudor-containing protein 7 (TDRD7)
- pfam00567
Location:643 → 762
- TUDOR; Tudor domain
-
XM_030253051.2 → XP_030108911.1 tudor domain-containing protein 7 isoform X4
- Conserved Domains (2) summary
-
- cd09974
Location:55 → 119
- LOTUS_3_TDRD7; The third LOTUS domain on Tudor-containing protein 7 (TDRD7)
- pfam00567
Location:630 → 740
- TUDOR; Tudor domain
-
XM_030253049.2 → XP_030108909.1 tudor domain-containing protein 7 isoform X1
- UniProtKB/Swiss-Prot
- B1AWG7, B1AWH5, Q8K1H1, Q8R181
- Conserved Domains (4) summary
-
- cd09973
Location:223 → 289
- LOTUS_2_TDRD7; The second LOTUS domain on Tudor-containing protein 7 (TDRD7)
- cd09974
Location:328 → 392
- LOTUS_3_TDRD7; The third LOTUS domain on Tudor-containing protein 7 (TDRD7)
- cd09986
Location:5 → 91
- LOTUS_1_TDRD7; The first LOTUS domain on Tudor-containing protein 7 (TDRD7)
- pfam00567
Location:903 → 1013
- TUDOR; Tudor domain
-
XM_006537519.2 → XP_006537582.1 tudor domain-containing protein 7 isoform X5
- Conserved Domains (2) summary
-
- cd09974
Location:3 → 67
- LOTUS_3_TDRD7; The third LOTUS domain on Tudor-containing protein 7 (TDRD7)
- pfam00567
Location:578 → 688
- TUDOR; Tudor domain