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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_009210.2 RefSeqGene
- Range
-
5000..94386
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001077690.1 → NP_001071158.1 alpha-1,2-mannosyltransferase ALG9 isoform b
See identical proteins and their annotated locations for NP_001071158.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the central coding region, compared to variant 1. The resulting isoform (b) lacks a 7-aa internal segment, compared to isoform a.
- Source sequence(s)
-
AK025498, AL136927, AP001781
- Consensus CDS
-
CCDS73379.1
- UniProtKB/Swiss-Prot
- Q6ZMD5, Q7Z4R4, Q96GS7, Q96PB9, Q9H068, Q9H6U8
- Related
- ENSP00000484200.1, ENST00000614444.4
- Conserved Domains (1) summary
-
- pfam03901
Location:60 → 482
- Glyco_transf_22; Alg9-like mannosyltransferase family
-
NM_001077691.2 → NP_001071159.1 alpha-1,2-mannosyltransferase ALG9 isoform c
See identical proteins and their annotated locations for NP_001071159.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. The resulting isoform (c) has a shorter N-terminus compared to isoform a. Variants 3, 9, and 10 all encode the same isoform (c).
- Source sequence(s)
-
AK025498, AP001781, BC009255, DA257621, FP884232
- Consensus CDS
-
CCDS41714.1
- UniProtKB/TrEMBL
-
B4DQI3
- Related
- ENSP00000435517.1, ENST00000531154.5
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 318
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001077692.2 → NP_001071160.1 alpha-1,2-mannosyltransferase ALG9 isoform d
See identical proteins and their annotated locations for NP_001071160.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) contains a distinct 5' UTR, lacks an in-frame portion of the 5' coding region, and uses an alternate in-frame splice site in the central coding region, compared to variant 1. The resulting isoform (d) has a shorter N-terminus and lacks a 7-aa internal segment, compared to isoform a. Variants 4-8 all encode the same isoform (d).
- Source sequence(s)
-
AK025498, AL136927, AP001781, DA257621, FP884232
- Consensus CDS
-
CCDS53709.1
- UniProtKB/TrEMBL
-
B4DQI3
- Related
- ENSP00000381090.2, ENST00000398006.6
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 311
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352409.1 → NP_001339338.1 alpha-1,2-mannosyltransferase ALG9 isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (5), as well as variants 4 and 6-8, encodes isoform d.
- Source sequence(s)
-
AP001781, FP884232
- Consensus CDS
-
CCDS53709.1
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 311
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352410.1 → NP_001339339.1 alpha-1,2-mannosyltransferase ALG9 isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (6), as well as variants 4, 5, 7, and 8, encodes isoform d.
- Source sequence(s)
-
AP001781, FP884232
- Consensus CDS
-
CCDS53709.1
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 311
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352411.2 → NP_001339340.1 alpha-1,2-mannosyltransferase ALG9 isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (7), as well as variants 4-6 and 8, encodes isoform d.
- Source sequence(s)
-
AP001781, FP884232
- Consensus CDS
-
CCDS53709.1
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 311
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352412.2 → NP_001339341.1 alpha-1,2-mannosyltransferase ALG9 isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (8), as well as variants 4-7, encodes isoform d.
- Source sequence(s)
-
AP001781, FP884232
- Consensus CDS
-
CCDS53709.1
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 311
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352413.1 → NP_001339342.1 alpha-1,2-mannosyltransferase ALG9 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (9), as well as variants 3 and 10, encodes isoform c.
- Source sequence(s)
-
AP001781, FP884232
- Consensus CDS
-
CCDS41714.1
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 318
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352414.2 → NP_001339343.1 alpha-1,2-mannosyltransferase ALG9 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (10), as well as variants 3 and 9, encodes isoform c.
- Source sequence(s)
-
AP001781, FP884232
- Consensus CDS
-
CCDS41714.1
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 318
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352415.1 → NP_001339344.1 alpha-1,2-mannosyltransferase ALG9 isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (11), as well as variant 12, encodes isoform e.
- Source sequence(s)
-
AP001781, FP884232
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 311
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352416.1 → NP_001339345.1 alpha-1,2-mannosyltransferase ALG9 isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (12), as well as variant 11, encodes isoform e.
- Source sequence(s)
-
AP001781, FP884232
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 311
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352417.1 → NP_001339346.1 alpha-1,2-mannosyltransferase ALG9 isoform f
Status: REVIEWED
- Description
- Transcript Variant: This variant (13) encodes the longest isoform (f).
- Source sequence(s)
-
AP001781, FP884232
- Conserved Domains (1) summary
-
- pfam03901
Location:60 → 482
- Glyco_transf_22; Alg9-like mannosyltransferase family
-
NM_001352418.1 → NP_001339347.1 alpha-1,2-mannosyltransferase ALG9 isoform g
Status: REVIEWED
- Source sequence(s)
-
AP001781, FP884232
- Conserved Domains (1) summary
-
- pfam03901
Location:60 → 441
- Glyco_transf_22; Alg9-like mannosyltransferase family
-
NM_001352419.1 → NP_001339348.1 alpha-1,2-mannosyltransferase ALG9 isoform h
Status: REVIEWED
- Source sequence(s)
-
AP001781, FP884232
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 318
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352420.2 → NP_001339349.1 alpha-1,2-mannosyltransferase ALG9 isoform i
Status: REVIEWED
- Source sequence(s)
-
AP001781, FP884232
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 311
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352421.2 → NP_001339350.1 alpha-1,2-mannosyltransferase ALG9 isoform j
Status: REVIEWED
- Source sequence(s)
-
AP001781, FP884232
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 311
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352422.2 → NP_001339351.1 alpha-1,2-mannosyltransferase ALG9 isoform k
Status: REVIEWED
- Source sequence(s)
-
AP001781, FP884232
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 286
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_001352423.2 → NP_001339352.1 alpha-1,2-mannosyltransferase ALG9 isoform l
Status: REVIEWED
- Source sequence(s)
-
AP001781, FP884232
- UniProtKB/TrEMBL
-
B4DQI3
- Conserved Domains (1) summary
-
- cl21590
Location:1 → 270
- PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
-
NM_024740.2 → NP_079016.2 alpha-1,2-mannosyltransferase ALG9 isoform a
See identical proteins and their annotated locations for NP_079016.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform a.
- Source sequence(s)
-
AK025498, AP001781, BC009255
- Consensus CDS
-
CCDS73380.1
- UniProtKB/Swiss-Prot
-
Q9H6U8
- Related
- ENSP00000482437.1, ENST00000616540.5
- Conserved Domains (1) summary
-
- pfam03901
Location:60 → 489
- Glyco_transf_22; Alg9-like mannosyltransferase family
RNA
-
NR_147984.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AP001781, FP884232
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
111768025..111871581 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017018314.3 → XP_016873803.1 alpha-1,2-mannosyltransferase ALG9 isoform X4
-
XM_024448695.2 → XP_024304463.1 alpha-1,2-mannosyltransferase ALG9 isoform X3
- Conserved Domains (1) summary
-
- pfam03901
Location:60 → 482
- Glyco_transf_22; Alg9-like mannosyltransferase family
-
XM_005277723.6 → XP_005277780.1 alpha-1,2-mannosyltransferase ALG9 isoform X1
See identical proteins and their annotated locations for XP_005277780.1
- Conserved Domains (1) summary
-
- pfam03901
Location:60 → 489
- Glyco_transf_22; Alg9-like mannosyltransferase family
-
XM_006718913.4 → XP_006718976.1 alpha-1,2-mannosyltransferase ALG9 isoform X2
- Conserved Domains (1) summary
-
- pfam03901
Location:60 → 489
- Glyco_transf_22; Alg9-like mannosyltransferase family
-
XM_047427609.1 → XP_047283565.1 alpha-1,2-mannosyltransferase ALG9 isoform X5
RNA
-
XR_001747968.3 RNA Sequence
-
XR_001747967.3 RNA Sequence
-
XR_007062503.1 RNA Sequence
-
XR_001747977.2 RNA Sequence
-
XR_007062504.1 RNA Sequence
-
XR_001747974.2 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
111778034..111881824 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054369984.1 → XP_054225959.1 alpha-1,2-mannosyltransferase ALG9 isoform X4
-
XM_054369983.1 → XP_054225958.1 alpha-1,2-mannosyltransferase ALG9 isoform X3
-
XM_054369981.1 → XP_054225956.1 alpha-1,2-mannosyltransferase ALG9 isoform X1
-
XM_054369982.1 → XP_054225957.1 alpha-1,2-mannosyltransferase ALG9 isoform X2
-
XM_054369985.1 → XP_054225960.1 alpha-1,2-mannosyltransferase ALG9 isoform X5
RNA
-
XR_008488452.1 RNA Sequence
-
XR_008488451.1 RNA Sequence
-
XR_008488453.1 RNA Sequence
-
XR_008488456.1 RNA Sequence
-
XR_008488454.1 RNA Sequence
-
XR_008488455.1 RNA Sequence