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    Ctsz cathepsin Z [ Mus musculus (house mouse) ]

    Gene ID: 64138, updated on 2-Nov-2024

    Summary

    Official Symbol
    Ctszprovided by MGI
    Official Full Name
    cathepsin Zprovided by MGI
    Primary source
    MGI:MGI:1891190
    See related
    Ensembl:ENSMUSG00000016256 AllianceGenome:MGI:1891190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CTSX; D2Wsu143e
    Summary
    This gene encodes a member of the peptidase C1 (papain) family of cysteine proteases. The encoded preproprotein is proteolytically processed to generate a mature enzyme with carboxypeptidase activity. An enzymatically inactive form of the protein, that is associated with the propeptide, may be involved in cancer cell invasion and proliferation. Homozygous knockout mice for this gene exhibit impaired cancer cell invasion in a breast cancer model. [provided by RefSeq, Aug 2015]
    Expression
    Ubiquitous expression in placenta adult (RPKM 212.4), duodenum adult (RPKM 161.8) and 27 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Ctsz in Genome Data Viewer
    Location:
    2 H4; 2 97.94 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (174269287..174280832, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (174427494..174439039, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_06635 Neighboring gene GNAS antisense RNA 1 Neighboring gene STARR-seq mESC enhancer starr_06637 Neighboring gene GNAS complex locus Neighboring gene STARR-seq mESC enhancer starr_06638 Neighboring gene STARR-positive B cell enhancer ABC_E10168 Neighboring gene predicted gene, 30189 Neighboring gene STARR-positive B cell enhancer ABC_E1611 Neighboring gene STARR-positive B cell enhancer ABC_E1612 Neighboring gene negative elongation factor complex member C/D, Th1l Neighboring gene STARR-positive B cell enhancer ABC_E6030 Neighboring gene ribosomal protein L30, pseudogene 5 Neighboring gene tubulin, beta 1 class VI

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (1)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables carboxypeptidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables cysteine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables cysteine-type endopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in epithelial tube branching involved in lung morphogenesis IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in negative regulation of plasminogen activation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of plasminogen activation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in proteolysis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in proteolysis involved in protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in cell cortex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cell cortex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    located_in collagen-containing extracellular matrix HDA PubMed 
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasmic vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in growth cone ISO
    Inferred from Sequence Orthology
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in lysosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in lysosome ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    cathepsin Z
    Names
    cathepsin X
    NP_071720.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_022325.5NP_071720.1  cathepsin Z preproprotein

      See identical proteins and their annotated locations for NP_071720.1

      Status: REVIEWED

      Source sequence(s)
      AI834947, AK159618, AL844534, BY319344
      Consensus CDS
      CCDS17152.1
      UniProtKB/Swiss-Prot
      Q9WUU7
      UniProtKB/TrEMBL
      Q545I6, Q9ES94
      Related
      ENSMUSP00000016400.9, ENSMUST00000016400.9
      Conserved Domains (1) summary
      cd02698
      Location:64305
      Peptidase_C1A_CathepsinX; Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity. It can also act as a carboxydipeptidase, like cathepsin B, but has been shown to preferentially cleave substrates through a monopeptidyl ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      174269287..174280832 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)